New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3379338	51 (0.900)	6 (0.110)	6/242	NT	10.8%	coding (811/972 nt)	tnpS	cointegrate resolution protein S
	?	NC_002947	= 3379373	52 (0.990)					coding (776/972 nt)	tnpS	cointegrate resolution protein S

CAGGTTTAGCTGCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGAACACTGCACCACGGGC  >  NC_002947/3379227‑3379512                                                                                                                                                   |                                                                                                                                            cAGGTTTAGCTGCAAGGCCGCCAAAGGATATGGCGGGGTCTATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaa                                                                                                                                           >  2:63160‑M2/1‑147 (MQ=255) cAGGTTTAGCTGCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCTCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaa                                                                                                                                           >  4:295413‑M2/1‑147 (MQ=255)    gTTTAGCTGCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaatgg                                                                                                                                        >  8:337007‑M2/1‑144 (MQ=255)          cTGCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGgtg                                                                                                                                  >  6:219367/1‑149 (MQ=255)          cTGCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGgtg                                                                                                                                  >  8:53244/1‑149 (MQ=255)            gCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTa                                                                                                                                >  3:133569/1‑149 (MQ=255)               aGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAg                                                                                                                             >  8:103824/1‑149 (MQ=255)               aGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAg                                                                                                                             >  6:71765/1‑149 (MQ=255)                    gccAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGgtg                                                                                                                                  >  6:294679/1‑139 (MQ=255)                    gccAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGgtg                                                                                                                                  <  5:294679/139‑1 (MQ=255)                    gccAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCgg                                                                                                                        <  5:108032/149‑1 (MQ=255)                      cAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGcc                                                                                                                      >  5:127890/1‑149 (MQ=255)                                       tCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATAc                                                                                                               <  5:353224/139‑1 (MQ=255)                                       tCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATAc                                                                                                               >  6:353224/1‑139 (MQ=255)                                          aTGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAg                                                                                                  <  6:127890/149‑1 (MQ=255)                                          aTGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAg                                                                                                  <  4:213568/149‑1 (MQ=255)                                             tAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGa                                                                                                <  4:133569/148‑1 (MQ=255)                                                 gcATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTgg                                                                                           >  6:50144/1‑149 (MQ=255)                                                 gcATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTgg                                                                                           >  2:132222/1‑149 (MQ=255)                                                      gCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTACCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGa                                                                                                <  6:118618/139‑1 (MQ=255)                                                      gCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTACCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGa                                                                                                >  5:118618/1‑139 (MQ=255)                                                         gACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGcaacaa                                                                                   <  1:132222/149‑1 (MQ=255)                                                               aTGTCTTTCCAGCCTACATCGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGa                                                                              <  5:219367/148‑1 (MQ=255)                                                                 gTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTg                                                                                                     >  4:252751/1‑123 (MQ=255)                                                                 gTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTg                                                                                                     <  3:252751/123‑1 (MQ=255)                                                                   cTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAgg                                                                         >  5:35295/1‑149 (MQ=255)                                                                     ccatgcgcTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAg                                                                          <  7:217673/139‑1 (MQ=255)                                                                      tCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCt                                                                       <  7:103824/148‑1 (MQ=255)                                                                      tCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTg                                                                      >  5:122505/1‑149 (MQ=255)                                                                               cATAGGTCATCAAGGCCTTGAGGTCCCAGCAATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATg                                                              >  7:55273/1‑148 (MQ=255)                                                                               cATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGa                                                                              <  3:258244/132‑1 (MQ=255)                                                                               cATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGa                                                                              >  4:258244/1‑132 (MQ=255)                                                                                   ggTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTAc                                                                                                                               <  8:137419/79‑1 (MQ=255)                                                                                   ggTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAg                                                          <  8:55273/148‑1 (MQ=255)                                                                                   ggTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAg                                                          <  5:71765/148‑1 (MQ=255)                                                                                    gacatcaAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGAGCAGCGAATGCCTGGTGTACAGCTCGCCCGATATACCGGCGCGATGTAGGATCTCGCGCAACAACCTGATCAGGCTGCCGGGAAGCAAGGc                                                        >  5:162022/3‑149 (MQ=255)                                                                                    gTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGc                                                        <  8:254622/149‑1 (MQ=255)                                                                                       atcaAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCtc                                                     >  8:225103/1‑149 (MQ=255)                                                                                          aaGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATc                                                                            >  4:195373/1‑123 (MQ=255)                                                                                          aaGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATc                                                                            <  3:195373/123‑1 (MQ=255)                                                                                          aaGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGACGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCtcgtc                                                  >  6:16188/1‑149 (MQ=255)                                                                                                   agttCCCAGCGATTTGCCTGGGCCCAAGAGGCGATGGCTGGGCGGAGCGAATGGCTGGTGTACAGCTCGGCCGATATAGGGGCGCGATGTAGGATCTGGCGCTACAAGCTGATCAGGCTGCCGGGATGGTAGGGCTCGTCGCTCTGGt                                          <  6:162022/145‑1 (MQ=255)                                                                                                       cccAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCa                                                                           <  5:48058/111‑1 (MQ=255)                                                                                                       cccAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCa                                                                           >  6:48058/1‑111 (MQ=255)                                                                                                        ccAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaatggctgggatctcaaggccttgatgacctatgtaggctggaaagac                                                                                             >  2:43707‑M2/1‑44 (MQ=255)                                                                                                        ccAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaatggctgggatctcaaggccttgatgacctatgtaggctggaaagac                                                                                             <  1:43707‑M2/92‑49 (MQ=255)                                                                                                        ccAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTTcccc                                     <  4:9752/148‑1 (MQ=255)                                                                                                        ccAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGcccc                                     >  1:351087/1‑148 (MQ=255)                                                                                                          aGCCATTTGTCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaatggctgggatctcaaggccttgatgacctatgtaggctggaaagacatcaagtctgccatgcgctacatcgaccccgccatatcctttggcggccttgcagcta                                   <  4:145958‑M2/148‑107 (MQ=255)                                                                                                          aGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGAGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTTCCGGTATGCAACGCCTCGTCGCTCAGGTGCCCCCAg                                  >  6:368319/1‑149 (MQ=255)                                                                                                              aTTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGaatggctgggatctcaaggccttgatgacctatgtaggctggaaagacatcaagtctgccatgcgctacatcgaccccgccatatcctttggcggccttgcagctaaacct                              <  4:234670‑M2/149‑112 (MQ=255)                                                                                                                 tGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATcc                            <  7:53244/148‑1 (MQ=255)                                                                                                                    cGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGc                        <  7:225103/149‑1 (MQ=255)                                                                                                                    cGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGc                        <  3:294866/149‑1 (MQ=255)                                                                                                                        gCCCAAGAGGCGAAGCCACGGCGCAGCGaatggctgggatctcaaggccttgatgacctatgtaggctggaaagacatcaagtctgccatgcgctacatcgaccccgccatatcctttggcggccttgcagctaaacctgtccttgagc                    >  3:145958‑M2/1‑28 (MQ=255)                                                                                                                          ccAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAg                   >  1:75390/1‑148 (MQ=255)                                                                                                                           cAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGc                        >  7:342434/1‑142 (MQ=255)                                                                                                                           cAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGc                        <  8:342434/142‑1 (MQ=255)                                                                                                                           cAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGaa                 <  6:122505/149‑1 (MQ=255)                                                                                                                              gagGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGAacac              >  3:144783/1‑149 (MQ=255)                                                                                                                                 gCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGgcgc                                                                                        <  4:235970/72‑1 (MQ=255)                                                                                                                                 gCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGgcgc                                                                                        >  3:235970/1‑72 (MQ=255)                                                                                                                                   gAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGTATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGAAAGAAACCTGc           >  6:254465/1‑147 (MQ=255)                                                                                                                                   gAAGCCACGGAGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGAACACTGc           <  5:254465/147‑1 (MQ=255)                                                                                                                                       ccACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGAACACTGCACCACg     >  5:91512/1‑149 (MQ=255)                                                                                                                                        cACGGCGCAGCGaatggctgggatctcaaggccttgatgacctatgtaggctggaaagacatcaagtctgccatgcgctacatcgaccccgccatatcctttggcggccttgcagctaaacctgtccttgagcttcatgctggcccttt    >  3:234670‑M2/1‑12 (MQ=255)                                                                                                                                          cGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGAACACTGCACCACGGGc  <  2:351087/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                            CAGGTTTAGCTGCAAGGCCGCCAAAGGATATGGCGGGGTCGATGTAGCGCATGGCAGACTTGATGTCTTTCCAGCCTACATAGGTCATCAAGGCCTTGAGATCCCAGCCATTTGCCGTGGCCCAAGAGGCGAAGCCACGGCGCAGCGAATGGCTGGTGTACAGCTCGGCCGATATACCGGCGCGCTGTAGGATCTGGCGCAACAAGCTGATCAGGCTGCCGGGATGCAAGGCCTCGTCGCTCAGGTGCCCCCAGCGATCCAGGCGACAGAACACTGCACCACGGGC  >  NC_002947/3379227‑3379512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.