New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5118857	47 (0.830)	3 (0.060)	3/246	NT	5.9%	coding (631/1341 nt)	PP_4505	sensor histidine kinase
	?	NC_002947	= 5118883	52 (0.970)					coding (657/1341 nt)	PP_4505	sensor histidine kinase

TGACGCTGTCCATTACCCGCCCGCTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGT  >  NC_002947/5118735‑5119022                                                                                                                                                      |                                                                                                                                            tGACTCTGTCCATTACGGGCCCGCTCAGCCGGCTGGGCAGTGCCGGACTCGACCTGGGCCAGACCTCCTATCTGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGAGGAGT‑TTGGCGTGCTGGCCTAGGACTTCAACATGATGGgc                                                                                                                                             <  6:274505/149‑1 (MQ=255)         tCCATTACCCGCCCGCTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCt                                                                                                                                     >  5:71311/1‑149 (MQ=255)           cATTACCCGCCCGCTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTg                                                                                                                                    >  1:210040/1‑148 (MQ=255)            aTTACCCGCCCGCTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGc                                                                                                                                   >  3:259052/1‑148 (MQ=255)                   gcccgcTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAg                                                                                                                               <  4:64946/145‑1 (MQ=255)                   gcccgcTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAg                                                                                                                               >  3:64946/1‑145 (MQ=255)                   gcccgcTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCAc                                                                                                                            >  7:242200/1‑148 (MQ=255)                         tAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTgg                                                                                                                      >  1:139676/1‑148 (MQ=255)                           aGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGca                                                                                                                    <  6:165508/148‑1 (MQ=255)                           aGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGca                                                                                                                    <  2:210040/148‑1 (MQ=255)                                         tGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCaaa                                                                                                                                >  3:153836/1‑122 (MQ=255)                                         tGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCaaa                                                                                                                                <  4:153836/122‑1 (MQ=255)                                           ccGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTa                                                                                                   >  2:359607/1‑149 (MQ=255)                                           ccGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTa                                                                                                   <  4:259052/149‑1 (MQ=255)                                            cGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTAc                                                                                                  <  1:359607/149‑1 (MQ=255)                                              tACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTAcgc                                                                                                >  5:130846/1‑149 (MQ=255)                                                cacGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAATGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGa                                                                                              <  1:232002/149‑1 (MQ=255)                                                 acGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGAc                                                                                             <  2:167607/149‑1 (MQ=255)                                                         ggCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTcc                                                                                       <  2:139676/147‑1 (MQ=255)                                                              gACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAAc                                                                                <  6:130846/149‑1 (MQ=255)                                                               accaccTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACt                                                                               >  3:104866/1‑149 (MQ=255)                                                                  accTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTgcg                                                                            >  5:288327/1‑149 (MQ=255)                                                                    cTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGAc                                                                                             >  7:211555/1‑130 (MQ=255)                                                                    cTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGAc                                                                                             <  8:211555/130‑1 (MQ=255)                                                                      aTCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCg                                                                        >  4:100301/1‑149 (MQ=255)                                                                       tCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGc                                                                       >  7:98803/1‑149 (MQ=255)                                                                          gcagAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCAc                                                                    >  8:23741/1‑149 (MQ=255)                                                                          gcagAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCAc                                                                    >  2:139419/1‑149 (MQ=255)                                                                            agAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTg                                                                  <  7:23741/149‑1 (MQ=255)                                                                               aCAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTGTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGc                                                                >  1:58475/1‑149 (MQ=255)                                                                                  gCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCAc                                                                                    >  2:266611/1‑125 (MQ=255)                                                                                  gCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTACAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCAc                                                                                    <  1:266611/125‑1 (MQ=255)                                                                                   ccTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGc                                                           >  6:344666/1‑149 (MQ=255)                                                                                   ccTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGc                                                           >  6:18754/1‑149 (MQ=255)                                                                                       gCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTgcg                                                       >  5:133868/1‑149 (MQ=255)                                                                                             cTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCgc                                                 >  7:88910/1‑149 (MQ=255)                                                                                               ggCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTc                                                                                        <  3:102858/108‑1 (MQ=255)                                                                                               ggCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTc                                                                                        >  4:102858/1‑108 (MQ=255)                                                                                                   gcgcggcgcgACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCgccctggc                                           <  4:104866/149‑1 (MQ=255)                                                                                                    cgcggcgcgACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCATAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCggcctggcc                                          <  2:104284/149‑1 (MQ=255)                                                                                                           cgacgaGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCg                                   <  6:71311/149‑1 (MQ=255)                                                                                                              cgaGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAAc                                >  8:41561/1‑149 (MQ=255)                                                                                                                  t‑ttGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCgcacgccaaactcgtcgcgccgcgctgccagccgtgccaggctgttctgctgataggtggtctggcccaggtcgtgtacggcactgcgcaggcggcttagcgggcgggtaatg                            <  3:50104‑M2/149‑114 (MQ=255)                                                                                                                  t‑ttGGCGCGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACgcgc                            >  2:253350/1‑149 (MQ=255)                                                                                                                      ggCGTGCTGGCCAAGGACTTCAACAAGATGGGCgcacgccaaactcgtcgcgccgcgctgccagccgtgccaggctgttctgctgatag                                                                                     >  1:226647‑M2/1‑33 (MQ=255)                                                                                                                      ggCGTGCTGGCCAAGGACTTCAACAAGATGGGCgcacgccaaactcgtcgcgccgcgctgccagccgtgccaggctgttctgctgatag                                                                                     <  2:226647‑M2/89‑57 (MQ=255)                                                                                                                        cGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGc                       <  5:344666/149‑1 (MQ=255)                                                                                                                              ggCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAAcgc                              <  6:9650/136‑1 (MQ=255)                                                                                                                              ggCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAAcgc                              >  5:9650/1‑136 (MQ=255)                                                                                                                                   aGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCgg            <  5:18754/149‑1 (MQ=255)                                                                                                                                        ttCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGcc                           >  2:319873/1‑129 (MQ=255)                                                                                                                                        ttCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGcc                           <  1:319873/129‑1 (MQ=255)                                                                                                                                        ttCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgc       >  5:166517/1‑149 (MQ=255)                                                                                                                                        ttCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgc       >  8:110577/1‑149 (MQ=255)                                                                                                                                        ttCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgc       >  8:238206/1‑149 (MQ=255)                                                                                                                                          caacaaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgcgc     >  6:25389/1‑149 (MQ=255)                                                                                                                                           aacaaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCt    >  6:338354/1‑149 (MQ=255)                                                                                                                                             caaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt  >  3:264369/1‑149 (MQ=255)                                                                                                                                             caaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt  <  7:41561/149‑1 (MQ=255)                                                                                                                                                     gcgcACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGc                       <  4:160455/120‑1 (MQ=255)                                                                                                                                                     gcgcACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGc                       >  3:160455/1‑120 (MQ=255)                                                                                                                                                      |                                                                                                                                            TGACGCTGTCCATTACCCGCCCGCTAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGT‑TTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGT  >  NC_002947/5118735‑5119022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.