New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5467363 =58 (1.020)4 (0.070) 4/248 NT 7.2% coding (483/1002 nt) rlpA RlpA‑like lipoprotein
?NC_002947 5467409 = 48 (0.890)coding (437/1002 nt) rlpA RlpA‑like lipoprotein

GCGGATCGATACCCTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGTACCCTCGGCGCGGTAGTT  >  NC_002947/5467263‑5467557
                                                                                                                                                  |                                                                                                                                                    
ggcagaacactgccaacggcgagctgtacgacctgtatggcatgagcgcagcgcacaagaccctgccgctgccagcctatgtgcgggtgaccaacctggcGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGcc                                                                                                                                                    >  3:224756‑M1/101‑149 (MQ=255)
    aTCGATACCCTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGt                                                                                                                                                >  5:288782/1‑149 (MQ=255)
     aacactgccaacggcgagctgtacgacctgtatggcatgagcgcagcgcacaagaccctgccgctgccagcctatgtgcgggtgaccaacctggcGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGtt                                                                                                                                               >  1:192970‑M1/96‑149 (MQ=255)
      acactgccaacggcgagctgtacgacctgtatggcatgagcgcagcgcacaagaccctgccgctgccagcctatgtgcgggtgaccaacctggcGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTg                                                                                                                                              >  7:337427‑M1/95‑149 (MQ=255)
          aCCCTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCa                                                                                                                                          >  5:331073/1‑149 (MQ=255)
            ccTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCAcc                                                                                                                                        >  6:284416/1‑149 (MQ=255)
            ccTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCAcc                                                                                                                                        >  2:4230/1‑149 (MQ=255)
            ccTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCACGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACAGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCAcc                                                                                                                                        >  1:271917/1‑149 (MQ=255)
             cTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCAccc                                                                                                                                       <  6:331073/149‑1 (MQ=255)
              tCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAgg                                                                                                                                                 <  8:46603/138‑1 (MQ=255)
              tCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAgg                                                                                                                                                 >  7:46603/1‑138 (MQ=255)
               caccgcgCATGTGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCg                                                                                                                                      >  6:369977/4‑148 (MQ=255)
                       acaTGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTTGCCAGGTTGGTCACCCGCACATAGGc                                                                                                                             <  1:188580/149‑1 (MQ=255)
                         aTGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTg                                                                                                                           >  4:162124/1‑149 (MQ=255)
                          tGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTgg                                                                                                                          <  5:291644/149‑1 (MQ=255)
                             gcgGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAg                                                                                                                       >  4:185360/1‑149 (MQ=255)
                               ggTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCg                                                                                                                     >  2:235689/1‑149 (MQ=255)
                                   ccGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGTCAGCGGCa                                                                                                                  <  3:132347/148‑1 (MQ=255)
                                   ccGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAg                                                                                                                 >  1:255740/1‑149 (MQ=255)
                                     gATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGt                                                                                                                                                <  5:68979/116‑1 (MQ=255)
                                     gATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGAAAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGt                                                                                                                                                >  6:68979/1‑116 (MQ=255)
                                           ggCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTc                                                                                                             <  5:369977/145‑1 (MQ=255)
                                           ggCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTtgt                                                                                                         <  7:131813/149‑1 (MQ=255)
                                            gCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAgg                                                                                                                <  6:201239/141‑1 (MQ=255)
                                            gCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAgg                                                                                                                >  5:201239/1‑141 (MQ=255)
                                                 gCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGtgcgctg                                                                                                   <  5:284416/149‑1 (MQ=255)
                                                 gCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACAGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGtgcgct                                                                                                    <  2:271917/148‑1 (MQ=255)
                                                  ccGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGtgcgctgc                                                                                                  >  6:323080/1‑149 (MQ=255)
                                                               cgGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGTCTGGCAGCGGCAGGGTCtt                                                                                                           <  1:235976/127‑1 (MQ=255)
                                                               cgGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGCCTGGCAGCGGCAGGGTCtt                                                                                                           >  2:235976/1‑127 (MQ=255)
                                                                  cagcaTAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAgg                                                                                  <  2:130485/149‑1 (MQ=255)
                                                                    gcaTAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTc                                                                                <  3:185360/149‑1 (MQ=255)
                                                                          gACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAg                                                                                   >  1:5365/1‑140 (MQ=255)
                                                                          gACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAg                                                                                   <  2:5365/140‑1 (MQ=255)
                                                                              aGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCg                                                                      <  1:235689/149‑1 (MQ=255)
                                                                               gTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGc                                                                     >  4:14111/1‑149 (MQ=255)
                                                                                tCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAg                                                                                                                                                  <  1:231570/71‑1 (MQ=255)
                                                                                tCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAg                                                                                                                                                  >  2:231570/1‑71 (MQ=255)
                                                                                tCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGcc                                                                    <  1:4230/149‑1 (MQ=255)
                                                                                tCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGcc                                                                    >  7:122203/1‑149 (MQ=255)
                                                                                   atgatTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGtt                                                                 <  2:255740/149‑1 (MQ=255)
                                                                                      atTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTgg                                                               <  5:323080/148‑1 (MQ=255)
                                                                                           gtcggAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAgtgt                                                         >  3:197277/1‑149 (MQ=255)
                                                                                           caacctggcgaacggccgcagcgtgatccttcgggtgaacgaccgtggcccgttcGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAgtgt                                                         >  7:337427‑M2/56‑149 (MQ=255)
                                                                                            aacctggcgaacggccgcagcgtgatccttcgggtgaacgaccgtggcccgttcGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGtt                                                        >  1:192970‑M2/55‑149 (MQ=255)
                                                                                             cggAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTc                                                       >  3:59435/1‑149 (MQ=255)
                                                                                                 ggcgaacggccgcagcgtgatccttcgggtgaacgaccgtggcccgttcGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGcc                                                   >  3:224756‑M2/50‑149 (MQ=255)
                                                                                                  tAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGccc                                                  <  4:197277/149‑1 (MQ=255)
                                                                                                           cgcagcgtgatccttcgggtgaacgaccgtggcccgttcGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACtt                                         <  4:224756‑M2/110‑1 (MQ=255)
                                                                                                                   gTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGt                                 <  6:40467/149‑1 (MQ=255)
                                                                                                                     tCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTAc                               >  3:8073/1‑149 (MQ=255)
                                                                                                                         ccGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGt                                      <  2:356996/138‑1 (MQ=255)
                                                                                                                         ccGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGCTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGt                                      >  1:356996/1‑138 (MQ=255)
                                                                                                                               gATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCg                     >  6:94979/1‑149 (MQ=255)
                                                                                                                                    cGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGTAccc                <  3:14111/149‑1 (MQ=255)
                                                                                                                                     gCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGt                    >  1:361677/1‑144 (MQ=255)
                                                                                                                                     gCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGt                    <  2:361677/144‑1 (MQ=255)
                                                                                                                                         cGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGTACCCTCgg            <  5:94979/148‑1 (MQ=255)
                                                                                                                                                  gCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGTACCCTCGGCGCGGTAGtt  <  2:192970/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GCGGATCGATACCCTCGACGCGCACATGCGCGGTGCCGATCTCGGCATAGCCGAGCTTTTTCGCGGCAGCATAGGACAAGTCGATGATTCGGTCGGAATAGAACGGGCCACGGTCGTTCACCCGAAGGATCACGCTGCGGCCGTTCGCCAGGTTGGTCACCCGCACATAGGCTGGCAGCGGCAGGGTCTTGTGCGCTGCGCTCATGCCATACAGGTCGTACAGCTCGCCGTTGGCAGTGTTCTGCCCGTGGAACTTGGTGCCGTACCACGATGCCGTACCCTCGGCGCGGTAGTT  >  NC_002947/5467263‑5467557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.