New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5657326 =51 (0.900)3 (0.060) 3/246 NT 5.7% coding (369/1998 nt) tktA transketolase A
?NC_002947 5657374 = 51 (0.950)coding (321/1998 nt) tktA transketolase A

GCCGTCGCCGAGGAACACATAGGTGTTGTGGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTGGACAGCACGAAGCGGT  >  NC_002947/5657227‑5657522
                                                                                                                                                   |                                                                                                                                                    
ctgcacctgaccggctacgacgtcaccatcgatgacgtcaaaggcttccgccaactgcacagccgcaccccgggccacccggaatacggctacaccccaGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTg                                                                                                                                                     >  7:176393‑M1/100‑149 (MQ=255)
   cacctgaccggctacgacgtcaccatcgatgacatcaaaggcttccgccaactgcacagccgcaccccgggccacccggaatacggctacaccccaTGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTggg                                                                                                                                                   >  3:53295‑M1/97‑148 (MQ=255)
          aGGAACACATAGGTGTTGTGGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGcc                                                                                                                                           <  3:241373/149‑1 (MQ=255)
               cacaTAGGTGTTGTGGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTAt                                                                                                                                       >  6:52433/1‑148 (MQ=255)
                acaTAGGTGTTGTGGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACGCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTc                                                                                                                                     <  1:89930/149‑1 (MQ=255)
                 cttAGGTGTTGTGGTCGACTATATTGTGCCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTGGGCCTGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTcc                                                                                                                                    <  6:300158/147‑1 (MQ=255)
                  aTAGGTGTTGTGGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCg                                                                                                                                   >  3:15776/1‑149 (MQ=255)
                   tAGGTGTTGTGGTCGACGTTTTTGTGGCGGTCACGGGTGAACTGGGCAGCCAGTAGTTTTTCGGCCTGGGCTAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCgg                                                                                                                                  <  4:15776/149‑1 (MQ=255)
                           gtgGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCg                                                                                                                          >  8:37549/1‑149 (MQ=255)
                           gtgGGCGACGTTTTTGGGGCCGGCCCGGGTGACCGGGGCCGCCAGTACTTTTTCGGCCCGGGCGAAGCCCACGGCGGTGGCGATACCCTGGCCGAGCGGGCCGGTCGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCg                                                                                                                          <  7:258212/149‑1 (MQ=255)
                             ggTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCggg                                                                                                                        >  4:137826/1‑149 (MQ=255)
                                 gacgaTATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGc                                                                                                                    >  2:255438/1‑149 (MQ=255)
                                        ttGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCtgt                                                                                                              <  6:287370/148‑1 (MQ=255)
                                        ttGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCtgt                                                                                                              <  1:255438/148‑1 (MQ=255)
                                           tgGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCtgtg                                                                                                             <  4:258362/146‑1 (MQ=255)
                                           tgGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCtgtg                                                                                                             >  3:258362/1‑146 (MQ=255)
                                             gCCGTCACGGGTGAACGGGGGAGCCAGTACTTTTTCGGCCAGGGCGACGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGGGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGtt                                                                                                        <  8:164073/149‑1 (MQ=255)
                                                    cGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGTGGCTGTGCAGTTGGCGGaa                                                                                                 <  7:37549/149‑1 (MQ=255)
                                                    cGGTTGAACTGGGCAGCCAGTACTTTTTCCGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGaa                                                                                                 <  5:52433/149‑1 (MQ=255)
                                                    cGGTGGAACTGGGCAGCCAGTACTTTTTCGTCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGaa                                                                                                 <  5:152768/149‑1 (MQ=255)
                                                       cggatcTGGGCATCAAGTAATTTTTCGGCCAGGGCTAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGc                                                                                               <  4:143566/143‑1 (MQ=255)
                                                          aaCTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCtt                                                                                            <  5:81576/148‑1 (MQ=255)
                                                           aCTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTg                                                                                          <  3:137826/149‑1 (MQ=255)
                                                               ggCAGCCAGTACATTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGc                                                                                               >  3:143566/1‑140 (MQ=255)
                                                                gCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGATTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGt                                                                                      >  2:363426/1‑148 (MQ=255)
                                                                 cAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAg                                                                                                <  5:301583/137‑1 (MQ=255)
                                                                 cAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAg                                                                                                >  6:301583/1‑137 (MQ=255)
                                                                   gCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGAGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATc                                                                                  >  1:99266/1‑149 (MQ=255)
                                                                      aGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGAt                                                                               >  5:341689/1‑149 (MQ=255)
                                                                          cTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGt                                                                            <  2:99266/148‑1 (MQ=255)
                                                                                 ggCCTGGGCTAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGAcgtcgt                                                                    <  5:53051/149‑1 (MQ=255)
                                                                                       ggCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCgg                                                              >  3:257202/1‑149 (MQ=255)
                                                                                        gCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCgg                                                                                                                                  <  4:269025/80‑1 (MQ=255)
                                                                                        gCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCgg                                                                                                                                  >  3:269025/1‑80 (MQ=255)
                                                                                         cgtaGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCGGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTc                                                            <  6:173863/146‑1 (MQ=255)
                                                                                         cGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCgg                                                                                                                                  <  2:184424/79‑1 (MQ=255)
                                                                                         cGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCgg                                                                                                                                  >  1:184424/1‑79 (MQ=255)
                                                                                         cGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGt                                                             >  5:55037/1‑148 (MQ=255)
                                                                                              cccACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTg                                                       >  1:138402/1‑149 (MQ=255)
                                                                                               cccaggcgttgaaaccaccaccggcccgctcggccagggtatcgccaacgcaTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTg                                                       >  3:53295‑M2/53‑148 (MQ=255)
                                                                                                cACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTg                                                       >  6:108363/1‑147 (MQ=255)
                                                                                                 caggcgttgaaaccaccaccggcccgctcggccagggtatcgccaacgccTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGACGTCATCGATGGTGACGTCGTAGCCGGTCAGGTgcag                                                    >  7:176393‑M2/51‑149 (MQ=255)
                                                                                                 aCGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTgcag                                                    >  4:74510/1‑149 (MQ=255)
                                                                                                 aCGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTAGTAGCCGGTCAGGTgcag                                                    >  4:128540/1‑149 (MQ=255)
                                                                                                         GGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAg                                             >  6:341689‑M1/1‑148 (MQ=255)
                                                                                                           aaccaccaccggcccgctcggccagggtatcgccaacgccTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTa                                           <  4:53295‑M2/108‑1 (MQ=255)
                                                                                                                cccTGGCCGAGCGGGCCGGTGGTGGATTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCa                                      <  1:363426/148‑1 (MQ=255)
                                                                                                                 ccTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGc                                                                 <  2:279805/120‑1 (MQ=255)
                                                                                                                 ccTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGc                                                                 >  1:279805/1‑120 (MQ=255)
                                                                                                                 ccTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGa                                              >  3:75864/1‑139 (MQ=255)
                                                                                                                 ccTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGa                                              <  4:75864/139‑1 (MQ=255)
                                                                                                                            gggCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTg                         <  2:138402/149‑1 (MQ=255)
                                                                                                                                  gtggtggtTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGtt                   >  6:161898/1‑149 (MQ=255)
                                                                                                                                  gtggtggtTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTAGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGtt                   <  3:128540/149‑1 (MQ=255)
                                                                                                                                   tggtggtTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTg                  <  2:111198/149‑1 (MQ=255)
                                                                                                                                     gtggtTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCa                                                           >  7:105682/1‑106 (MQ=255)
                                                                                                                                     gtggtTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCa                                                           <  8:105682/106‑1 (MQ=255)
                                                                                                                                           tCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTGGACAGCAc          >  2:82346/1‑149 (MQ=255)
                                                                                                                                             aacgccTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATg                                                                              >  3:46078‑M2/7‑79 (MQ=255)
                                                                                                                                             aacgccTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATg                                                                              <  4:46078‑M2/73‑1 (MQ=255)
                                                                                                                                              acgccTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGACGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTGGACAGCACGaa       <  8:176393‑M2/144‑1 (MQ=255)
                                                                                                                                                gccTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTGGACAGCACGAAGc     >  1:342548‑M2/4‑149 (MQ=255)
                                                                                                                                                   tGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTGGACAGCACGAAGCGGt  >  7:202817/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCCGTCGCCGAGGAACACATAGGTGTTGTGGTCGACGATATTGTGGCCGTCACGGTTGAACTGGGCAGCCAGTACTTTTTCGGCCAGGGCGAAGCCCACGGCGTTGGCGATACCCTGGCCGAGCGGGCCGGTGGTGGTTTCAACGCCTGGGGTGTAGCCGTATTCCGGGTGGCCCGGGGTGCGGCTGTGCAGTTGGCGGAAGCCTTTGATGTCATCGATGGTGACGTCGTAGCCGGTCAGGTGCAGCAGCGAGTAGATCAGCATCGAGCCGTGGCCGTTGGACAGCACGAAGCGGT  >  NC_002947/5657227‑5657522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.