New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 422593	58 (0.990)	3 (0.050)	3/242	NT	5.2%	coding (1355/2787 nt)	PP_0348	hypothetical protein
	?	NC_002947	= 422635	55 (1.000)					coding (1313/2787 nt)	PP_0348	hypothetical protein

TTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/422487‑422593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaactgaACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTGGCG  <  NC_002947/422635‑422489                                                                                                                                                                                                                                                                TTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCA                                                                                                           >  1:236611/1‑149         AGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCC                                                                                                   <  3:126273/149‑1             TCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGA                                                                                                <  2:236611/148‑1                                                                                                        CTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTGG    <  8:198136/149‑1                                                                                                         TGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTGGC   >  2:325161/1‑149                                                                                                           AACGTGGGTGACAGCTACTCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGAAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATTCACGCTGAAGCAGTACAGGCGCGCTACGCCGGACACATTGGCG  >  4:223640/1‑148                                                                                                                                                                                                                                                                TTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/422487‑422593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaactgaACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTGGCG  <  NC_002947/422635‑422489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.