New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 42259358 (0.990)3 (0.050) 3/242 NT 5.2% coding (1355/2787 nt) PP_0348 hypothetical protein
?NC_002947 = 422635 55 (1.000)coding (1313/2787 nt) PP_0348 hypothetical protein

CGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGT  >  NC_002947/422489‑422779
                                                                                                                                                   |                                                                                                                                                
cGCCAATGTGTCCGGCGTAGCGCGCCTGTACTGCTTCAGCGTGAATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTTCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGAGTAGCTGTCACCCACGTt                                                                                                                                                 >  4:223640‑M2/1‑147 (MQ=255)
cGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGt                                                                                                                                                  <  5:7729/147‑1 (MQ=255)
 gCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTtca                                                                                                                                               >  2:325161‑M2/1‑146 (MQ=255)
  ccAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTtcag                                                                                                                                              <  8:198136‑M2/149‑5 (MQ=255)
       gtgtCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTCCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTccc                                                                                                                                         <  7:198136/149‑1 (MQ=255)
       gtgtCCGGCGTAGAGCGCCTAGACTGGTGCAGCGTGCAGGCGTTCACGGTTGACCTCGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTccc                                                                                                                                         <  6:380396/149‑1 (MQ=255)
                    cgcgcCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCtt                                                                                                                            <  5:112929/149‑1 (MQ=255)
                            gACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCCACGTTCAGTTCCCGGACCATGTGCTTGACAt                                                                                                                       <  1:44084/147‑1 (MQ=255)
                                     accGTGCACGCATGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGt                                                                                                             >  5:318008/3‑147 (MQ=255)
                                       cGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCAt                                                                                                                                  >  8:340757/1‑124 (MQ=255)
                                       cGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCAt                                                                                                                                  <  7:340757/124‑1 (MQ=255)
                                            aTGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCcggc                                                                                                    >  1:349170/1‑149 (MQ=255)
                                              gCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCcggcgg                                                                                                  >  4:39175/1‑149 (MQ=255)
                                                   cACGGTTGACCTTGCTGTGCGCAGTCAGGCGACATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCAt                                                                                              <  1:332484/148‑1 (MQ=255)
                                                    aCGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATgg                                                                                            <  2:291560/149‑1 (MQ=255)
                                                     cGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGc                                                                                           <  6:336166/149‑1 (MQ=255)
                                                       gTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCtt                                                                                         >  6:187096/1‑149 (MQ=255)
                                                        ttGAGCTTGCTGTGCGCATGCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCGTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCttt                                                                                        <  4:237763/149‑1 (MQ=255)
                                                            ccTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCg                                                                                    >  7:321936/1‑149 (MQ=255)
                                                            ccTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCg                                                                                    >  4:71926/1‑149 (MQ=255)
                                                            ccTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCg                                                                                    >  4:367540/1‑149 (MQ=255)
                                                            ccTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCg                                                                                    >  7:149736/1‑149 (MQ=255)
                                                            ccTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCg                                                                                    >  7:284912/1‑149 (MQ=255)
                                                                gCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTgg                                                                                 <  3:71926/148‑1 (MQ=255)
                                                                gCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTgg                                                                                 <  2:170484/148‑1 (MQ=255)
                                                                 cTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTggg                                                                                <  6:318008/148‑1 (MQ=255)
                                                                    tgCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCAt                                                                             <  8:284912/148‑1 (MQ=255)
                                                                    tgCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATg                                                                            >  5:214891/1‑149 (MQ=255)
                                                                      cgcAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGa                                                                          <  6:214891/149‑1 (MQ=255)
                                                                      cgcAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGa                                                                          <  8:321936/149‑1 (MQ=255)
                                                                           tCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCACGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCAcc                                                                     >  2:301944/1‑149 (MQ=255)
                                                                             aGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCg                                                                   <  3:367540/149‑1 (MQ=255)
                                                                             aGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCg                                                                   >  3:267102/1‑149 (MQ=255)
                                                                                cgcCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCggg                                                                 >  5:136590/1‑148 (MQ=255)
                                                                                    aTTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTc                                                            <  8:149736/149‑1 (MQ=255)
                                                                                         ccTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCa                                                       <  1:129574/149‑1 (MQ=255)
                                                                                           tGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCag                                                      >  2:126480/1‑148 (MQ=255)
                                                                                              tctGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTtcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgccgga                                                   <  2:236611‑M2/148‑96 (MQ=255)
                                                                                                tGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCg                                                >  6:309237/1‑149 (MQ=255)
                                                                                                 ggAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTtcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgccggacact                                               <  3:126273‑M2/149‑100 (MQ=255)
                                                                                                  gAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCg                                                <  8:184214/147‑1 (MQ=255)
                                                                                                   aaCTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTa                                             <  3:39175/149‑1 (MQ=255)
                                                                                                      tgatgaGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCTGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATc                                           >  5:367454/1‑148 (MQ=255)
                                                                                                       gatgaGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCg                                          >  6:155914/1‑148 (MQ=255)
                                                                                                        atgaGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGaa                                        >  5:252846/1‑149 (MQ=255)
                                                                                                         tgaGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTtcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgccggacactttggcgaa                                       >  1:236611‑M2/1‑42 (MQ=255)
                                                                                                          gaGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAAc                                       >  5:255334/1‑148 (MQ=255)
                                                                                                          gaGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAAc                                       >  6:323666/1‑148 (MQ=255)
                                                                                                                ggTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGc                                 >  6:241856/1‑148 (MQ=255)
                                                                                                                 gtgtGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCaa                               <  5:241856/149‑1 (MQ=255)
                                                                                                                       aGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCTGGCATGGCTTTGCCGGGGGCATGGATCACCCGTGCAGTCAGCCAGAAGTCGGTATCGAACCACGGCAAGTTCtt                         <  1:211705/149‑1 (MQ=255)
                                                                                                                         gTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGa                       <  1:126480/149‑1 (MQ=255)
                                                                                                                         gTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGa                       <  6:252846/149‑1 (MQ=255)
                                                                                                                         gTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTAGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCtt                         >  7:326230/1‑147 (MQ=255)
                                                                                                                            cTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAgg                     <  5:187096/148‑1 (MQ=255)
                                                                                                                             tttGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGc                   >  7:215475/1‑149 (MQ=255)
                                                                                                                                  gTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGAtct              >  6:87366/1‑149 (MQ=255)
                                                                                                                                         tCACCCACGTTCAGTTCCCGGACCACGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGa        <  1:301944/148‑1 (MQ=255)
                                                                                                                                           aCCCACGTTCAGTTCCCGGACCATGTTCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAggg     <  2:349170/149‑1 (MQ=255)
                                                                                                                                           aCCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAggg     >  6:40805/1‑149 (MQ=255)
                                                                                                                                              ccACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCAc                                    <  7:294305/116‑1 (MQ=255)
                                                                                                                                              ccACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCAc                                    >  8:294305/1‑116 (MQ=255)
                                                                                                                                              ccACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAg                              <  5:196449/122‑1 (MQ=255)
                                                                                                                                              ccACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAg                              >  6:196449/1‑122 (MQ=255)
                                                                                                                                               cACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAAGCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGgtgt  <  8:326230/149‑1 (MQ=255)
                                                                                                                                               cACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGgtgt  <  4:267102/149‑1 (MQ=255)
                                                                                                                                                aCGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGc                                                         <  2:117049/93‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
CGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGT  >  NC_002947/422489‑422779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.