| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 599803 = | 39 (0.660) | 3 (0.060) | 3/238 | NT | 8.6% | coding (241/408 nt) | PP_0512 | hypothetical protein |
| ? | NC_002947 | 599853 = | 28 (0.520) | coding (191/408 nt) | PP_0512 | hypothetical protein | |||||
GGGCCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/599960‑599803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgctgcGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGGGC > NC_002947/599853‑599996 GGGCCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCC > 1:154298/1‑149 TTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGGCCGGTACCGGTCAGGttgc < 8:184769/149‑5 CCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCAGCCAGGCGCTGC < 1:62928/148‑1 CTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGC < 5:171692/112‑1 CTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGC > 6:171692/1‑112 GCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCG < 5:285855/147‑1 GCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCG > 6:285855/1‑147 CAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGC > 8:156384/1‑148 GCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGACCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGG < 6:33142/149‑1 GCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGGGC < 7:156384/149‑1 GGGCCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/599960‑599803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgctgcGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGGGC > NC_002947/599853‑599996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |