New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	716611 =	56 (0.950)	3 (0.050)	3/250	NT	5.6%	coding (189/465 nt)	PP_0610	hypothetical protein
	?	NC_002947	716644 =	46 (0.810)					coding (222/465 nt)	PP_0610	hypothetical protein

TAACCGGCTGCCCTTCGGGCATGTGCGCGGCACGTTCGCTGACACCCAGGTTCTGCAGCTGGAAAAAGCCGGTCTGGGTACTTTGCCACTGCCCAATCAGATCGTGCGGCCTGGGCGGTGGCGGGCACGCGCTACAAGCGTCAGGGGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/716762‑716611 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAGGGCAGC  >  NC_002947/716644‑716756                                                                                                                                                                                                                                                                           TAACCGGCTGCCCTTCGGGCATGTGCGCGGCACGTTCGCTGACTCCCAGGTTCTGCAGCTGGAAAACGCCGGGCTGGGTACTTTGCCACTGCCCAATCAGATCGTGCGGCCTGGGCGGTGGCGGGCCCGCGCTACAAGCATCAGGGGGC                                                                                                                      >  3:291687/1‑149                                                                                                                     GGTGGCGGGCACGCGCTACAAGCGTCAGGGGGCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAGGGCAGC  >  1:91019/1‑149                                                                                                                       TGGCGGGCACGCGCTACAAGCGTCAGGGGGCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGC                         <  7:149290/124‑1                                                                                                                       TGGCGGGCACGCGCTACAAGCGTCAGGGGGCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGC                         >  8:149290/1‑124                                                                                                                                                                                                                                                                           TAACCGGCTGCCCTTCGGGCATGTGCGCGGCACGTTCGCTGACACCCAGGTTCTGCAGCTGGAAAAAGCCGGTCTGGGTACTTTGCCACTGCCCAATCAGATCGTGCGGCCTGGGCGGTGGCGGGCACGCGCTACAAGCGTCAGGGGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/716762‑716611 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAGGGCAGC  >  NC_002947/716644‑716756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.