New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 716611 =56 (0.950)3 (0.050) 3/250 NT 5.6% coding (189/465 nt) PP_0610 hypothetical protein
?NC_002947 716644 = 46 (0.810)coding (222/465 nt) PP_0610 hypothetical protein

TCCTGAGCGTCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAGGGCAGCC  >  NC_002947/716463‑716757
                                                                                                                                                    |                                                                                                                                                  
tCCTGAGCGTCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACgg                                                                                                                                                    <  4:11252/149‑1 (MQ=255)
  cTGAGCGTCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGgc                                                                                                                                                  <  1:166343/149‑1 (MQ=255)
  cTGAGCGTCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGgc                                                                                                                                                  <  2:282782/149‑1 (MQ=255)
        gTCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGccccc                                                                                                                                            <  8:42933/149‑1 (MQ=255)
         tCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCt                                                                                                                                           <  1:141767/149‑1 (MQ=255)
         tCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCt                                                                                                                                           >  2:141767/1‑149 (MQ=255)
             gctgGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACg                                                                                                                                       >  3:297041/1‑149 (MQ=255)
             gctgGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACg                                                                                                                                       >  2:271158/1‑149 (MQ=255)
             gctgGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTCGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGACCCGGCGCCCCCAGACg                                                                                                                                       >  6:214722/1‑149 (MQ=255)
              ctgGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGAc                                                                                                                                        <  5:166206/147‑1 (MQ=255)
                  gCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTg                                                                                                                                   >  8:309323/1‑148 (MQ=255)
                   ccTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTa                                                                                                                                 <  8:54070/149‑1 (MQ=255)
                    cTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAg                                                                                                                                <  1:43425/149‑1 (MQ=255)
                       cTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAgcgc                                                                                                                             <  8:36103/149‑1 (MQ=255)
                           ccACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGc                                                                                                                         <  4:334618/149‑1 (MQ=255)
                           ccACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGc                                                                                                                         >  7:280102/1‑149 (MQ=255)
                             acaTCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGccc                                                                                                                       >  2:277350/1‑149 (MQ=255)
                                 cTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCa                                                                                                                   >  7:205393/1‑149 (MQ=255)
                                   gctgcccttcgggcatgtgcgcggcacgttcgctgacacccaggttctgcagctggaaaaagccggtctgggtactttgccactgcccaatcagatcgtgcggcctgggcggtGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCAcc                                                                                                                 >  1:91019‑M1/114‑149 (MQ=255)
                                     ccTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAgcgc                                                                                                                             <  7:170238/135‑1 (MQ=255)
                                     ccTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAgcgc                                                                                                                             >  8:170238/1‑135 (MQ=255)
                                     ccTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGc                                                                                                               >  7:211268/1‑149 (MQ=255)
                                               gcgcTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCa                                                                                                     >  5:33488/1‑149 (MQ=255)
                                                     gtggAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCTGCACGATCt                                                                                               >  7:14438/1‑149 (MQ=255)
                                                          gcacgttcgctgacacccaggttctgcagctggaaaaagccggtctgggtactttgccactgcccaatcagatcgtgcggcctgggcggtGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCa                                                                                                                   >  8:149290‑M1/91‑124 (MQ=255)
                                                          gcacgttcgctgacacccaggttctgcagctggaaaaagccggtctgggtactttgccactgcccaatcagatcgtgcggcctgggcggtGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCa                                                                                                                   <  7:149290‑M1/34‑1 (MQ=255)
                                                          aaCGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTg                                                                                          <  7:309323/149‑1 (MQ=255)
                                                           aCGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTg                                                                                          <  7:345753/148‑1 (MQ=255)
                                                            cgcgGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTggg                                                                                        <  1:277350/149‑1 (MQ=255)
                                                            cgcgGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTggg                                                                                        <  8:205393/149‑1 (MQ=255)
                                                            cgcgGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTggg                                                                                        <  6:33488/149‑1 (MQ=255)
                                                               ggATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAg                                                                                     >  4:368142/1‑149 (MQ=255)
                                                               ggATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGACTGGGCAg                                                                                     <  1:75148/149‑1 (MQ=255)
                                                                  tgtccGGCTACCTGAGGGATGGCCTGTTGGCGCGGGATGATTCTGTGCCCAGTTTGATGTGCGGGGTTCGCGAATTTTTTCGGGCGCCCCCTTAGGCTTGTAGCGCGTGCGCGCCACCGGGCAGGCCGCACGATCTGATTGGGGAGTg                                                                                   <  8:119055/145‑1 (MQ=255)
                                                                      cGGCTACCTGAGCGATGGCCTGATGTCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCGGGTGGACGCGAACTTGAACGGGCGCCGCCTGACGCTTGTAGCGCGTGCGCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCaaa                                                                              <  4:54066/149‑1 (MQ=255)
                                                                      cGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCaaa                                                                              <  8:211268/149‑1 (MQ=255)
                                                                        gCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGt                                                                            <  6:27989/149‑1 (MQ=255)
                                                                             cTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCa                                                                       <  3:368142/149‑1 (MQ=255)
                                                                               gAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTgg                                                                                         >  4:210017/1‑129 (MQ=255)
                                                                               gAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTgg                                                                                         <  3:210017/129‑1 (MQ=255)
                                                                                   gATGGACTGATGGCGCTGGAAGAGGCTGATGAAACTTTGATGGCCGTGGTACGCGAACTTGAACGGGCGCCCACTTACGCTTGTAGCGCGTGCCCGCAACCGCACAGTCAGCAAGATATGATTGGGCAGTGGCAAAGTACCCAGAcctt                                                                 >  2:160513/1‑147 (MQ=255)
                                                                                    aTGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGc                                                                >  7:147130/1‑149 (MQ=255)
                                                                                    aTGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGc                                                                <  4:297041/149‑1 (MQ=255)
                                                                                            agggCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCGACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTcc                                                         <  5:214722/146‑1 (MQ=255)
                                                                                            aTGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTcc                                                         <  8:280102/148‑1 (MQ=255)
                                                                                             tGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCAGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAg                                                       <  8:14438/149‑1 (MQ=255)
                                                                                                cgcTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTg                                                    <  1:271158/149‑1 (MQ=255)
                                                                                                 gcTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGt                                                                                                                           <  6:7482/77‑1 (MQ=255)
                                                                                                  cTGGAAGAGGCTGATGCCAATTTGCTGGCCTGTGTAAGCGAACTTGAACGGGCGACCCCTGACGCTTTTAGCTCGTGCCCGCCAACGAAAAGGCCGCACTATCTGATTGGGCAGTGGCAAAGTACCCAGACCTGCTTTTTCCAGCTGCa                                                  <  1:160513/149‑1 (MQ=255)
                                                                                                     gAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGaa                                               >  8:89915/1‑149 (MQ=255)
                                                                                                                 gCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAg                                   >  5:52586/1‑149 (MQ=255)
                                                                                                                 gCCACTATGCTGGCCGGGGTACGAGAACTTGAACGCGCGCCCCCTGACGATTGAAGCGCGTGACCGCCACCGCCCAGGCCGCACGATCTGAGAGGGCAGTGGCAAAGTACCCAGACCGGCTAATTCCAGCTGCAGAAACTGGGTGTGAg                                   >  4:291687/1‑149 (MQ=255)
                                                                                                                      tttGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAAc                              >  8:288365/1‑149 (MQ=255)
                                                                                                                             gCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTAcc                                                                         <  1:144190/99‑1 (MQ=255)
                                                                                                                             gCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTAcc                                                                         >  2:144190/1‑99 (MQ=255)
                                                                                                                                  ggTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGcaca                  >  3:242417/1‑149 (MQ=255)
                                                                                                                                       gcgAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGccc             >  7:307581/1‑149 (MQ=255)
                                                                                                                                       gcgAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGAGCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCCCATGccc             >  5:371151/1‑149 (MQ=255)
                                                                                                                                         gAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCg            >  2:123646/1‑148 (MQ=255)
                                                                                                                                           aCTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAg         <  8:307581/149‑1 (MQ=255)
                                                                                                                                             ttGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGc                                                   >  2:90071/1‑105 (MQ=255)
                                                                                                                                             ttGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGc                                                   <  1:90071/105‑1 (MQ=255)
                                                                                                                                                aaCGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGcac                   <  8:157690/134‑1 (MQ=255)
                                                                                                                                                aaCGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGcac                   >  7:157690/1‑134 (MQ=255)
                                                                                                                                                  cGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAGGGCAGcc  <  8:147130/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TCCTGAGCGTCCTGCTGGGCCTGCTTGCCACATCTGCCCTGCGCGACGCGCTGGTGGAAACGCGGATGACCGGCTACCTGAGCGATGGCCTGATGGCGCTGGAAGAGGCTGAGGCCACTTTGCTGGCCGGGGTACGCGAACTTGAACGGGCGCCCCCTGACGCTTGTAGCGCGTGCCCGCCACCGCCCAGGCCGCACGATCTGATTGGGCAGTGGCAAAGTACCCAGACCGGCTTTTTCCAGCTGCAGAACCTGGGTGTCAGCGAACGTGCCGCGCACATGCCCGAAGGGCAGCC  >  NC_002947/716463‑716757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.