New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	866552 =	40 (0.680)	3 (0.050)	3/244	NT	7.1%	coding (5/474 nt)	PP_0748	hypothetical protein
	?	NC_002947	866595 =	41 (0.740)					coding (48/474 nt)	PP_0748	hypothetical protein

AATGTAGGTGCTTGGTTGCAGCCCGACGGCCATGCGGTGGCAGGGCTCTTCCATAGCGTGAAAGTTATGGTGCTGCCGCCCGCGCGGGTTGGCAGCGGCCTTTTCGGCCAGCCCGGCGAACAGCGATTGGTCGATGAACGCAGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/866700‑866552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggcCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGAGCCCTGCCACCGCATGGCCGTCGGGCTGCAACCAAGCACCTACATTCCGCCGCATCGCCATTTGAGCGCCGACAAGGCTGAAACCT  >  NC_002947/866595‑866740                                                                                                                                                                                                                                                                                                         AATGTAGGTTCTTGTTAGCAGCCCTACGGCCATGCGGTGGCAGGGATCTTCCATATCGTGAAAGTTATGGTGCTGCCGCCCTCGCGGGTTTGCAGCGGCCTTTTCGGCCAGCCCGGCGAACAGCGATTGGTCGATGAACGCAGGCTGG                                                                                                                                                     <  2:67339/148‑1                                                                                                CGGCCTTTTCGGCCAGCCCGGCGAACAGCGATTGGTCGATGAACGCAGGCTGGCCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCAC                                                                                                   >  7:333069/1‑103                                                                                                          GGCCAGCCCGGCGAACAGCGATTGGTCGATGAACGCAGGCTGGCCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGA                                                                                        >  5:154601/1‑104                                                                                                          GGCCAGCCCGGCGAACAGCGATTGGTCGATGAACGCAGGCTGGCCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGA                                                                                        <  6:154601/104‑1                                                                                                                                                GCTGGCCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGAGCCCTGCCACCGCATGGCCGTCGGGCTGCAACCAAGCACCTACATTCCGCCGCATCGCCATTTGAGCGCCGACAAGGCTGAAA     <  1:333349/149‑1                                                                                                                                                 CTGGCAGAAAAGGCCGCTGCCAACCCGCGCGGGCGTCAGCACCATAACTTTCACGCTATTCAAGAGCCCTGCCACCGCATGGCCGTCGGGCTGCAACCAAGCACCTACATTCCGCAGCATCGCCAATTGAGCGCCGACAATGCTGAAAC    <  1:67339/149‑1                                                                                                                                                   gtCCGAAAAGGCCGCTGCCAAGCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGAGCCCTTCCACCTCATGGCCGTCTGGCTGCAACC                                                       <  2:28035/94‑1                                                                                                                                                    GCCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGAGCCCTGCCACCGCATGGCCGTCGGGCTGCAACCAAGCACCTACATTCCGCCGCATCGCCATTTGAGCGCCGACAAGGCTGAAACCT  <  2:191993/148‑1                                                                                                                                                    GCCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGAGCCCTGCCACCGCATGGCCGTCGGGCTGCAACCAAGCACCTACATTCCGCCGCATCGCCATTTGAGCGCCGACAAGGCTGAAACCT  <  2:209491/148‑1                                                                                                                                                                                                                                                                                                         AATGTAGGTGCTTGGTTGCAGCCCGACGGCCATGCGGTGGCAGGGCTCTTCCATAGCGTGAAAGTTATGGTGCTGCCGCCCGCGCGGGTTGGCAGCGGCCTTTTCGGCCAGCCCGGCGAACAGCGATTGGTCGATGAACGCAGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/866700‑866552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggcCGAAAAGGCCGCTGCCAACCCGCGCGGGCGGCAGCACCATAACTTTCACGCTATGGAAGAGCCCTGCCACCGCATGGCCGTCGGGCTGCAACCAAGCACCTACATTCCGCCGCATCGCCATTTGAGCGCCGACAAGGCTGAAACCT  >  NC_002947/866595‑866740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.