| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 938609 = | 39 (0.660) | 3 (0.050) | 3/246 | NT | 6.7% | coding (7013/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | 938682 = | 46 (0.820) | coding (6940/18933 nt) | PP_0806 | surface adhesion protein | |||||
GCACCGGCGCTTCGTCCCTGCCGGTGCAAATCGCTGCGCCAGACATCACCCCGCCGGTCACCCCGAGCGAGCTAGCGATCAGTGCCAACGGCAGCGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGATGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/938762‑938609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcacTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGGT > NC_002947/938682‑938829 GCACCGGCGCTTCGTCCCTGCCGGTGCAAATCGCTGCGCCAGACATCACCCCGCCGGTCACCCCGAGCGAGCTAGCGATCAGTGCCAACGGCAGCGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGAT < 2:90631/149‑1GCACCGGCGCTTCGTCCCTGCCGGTGCAAATCGCTGCGCCAGACATCACCCCGCCGGTCACCCCGAGCGAGCTAGCGATCAGTGCCAACGGCAGCGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGAT < 4:271511/149‑1 CAGTGCCAACGGCAGCGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGATGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCG > 6:290370/1‑149 AGTGCCAACGGCAGCGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGATGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGCAGCGC > 7:261863/1‑149 CGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGATGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATG < 5:290370/149‑1 GGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGCTTGAGGATGACGGTG > 7:355496/1‑148 GCACTGATAGCTAGCTCGCTCGGGGTGACAGGAGGTGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGTACGAAGCGCCGGTGCCAGCGATCTCCACCACGTCCAGCAGTTCGACGTTGGCCTGGGCCGGGTTGAGGATGACGGTt > 4:39885/1‑146 ACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGG > 7:299360/1‑149 CTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGGT < 8:299360/149‑1 GCACCGGCGCTTCGTCCCTGCCGGTGCAAATCGCTGCGCCAGACATCACCCCGCCGGTCACCCCGAGCGAGCTAGCGATCAGTGCCAACGGCAGCGAGGTCACCGGCCGCGCCGAAGTGGGCAGCACCGTGCGTGTGCTGGCCGCCGATGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/938762‑938609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcacTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGGT > NC_002947/938682‑938829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |