New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	938609 =	39 (0.660)	3 (0.050)	3/246	NT	6.7%	coding (7013/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	938682 =	46 (0.820)					coding (6940/18933 nt)	PP_0806	surface adhesion protein

TCCGGCGCGGTGATGTCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACG  >  NC_002947/938462‑938750                                                                                                                                                      |                                                                                                                                              tCCGGCGCGGTGATGTCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACggtggt                                                                                                                                              >  7:131477/1‑149 (MQ=255)  ccGGCGCGGTGATGTCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTTGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGGCGACCACCACACTACCCAGCACGgtggtg                                                                                                                                             >  5:331796/1‑149 (MQ=255)  accttcaccgtcatcctcaacccggcccaggccaacggcgaactgctggacgtggtggccatcgatggcaccggcgcttcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcag                                                                                                                                               <  8:299360‑M1/1‑1 (MQ=255)   ccttcaccgtcatcctcaacccggcccaggccaacggcgaactgctggacgtggtggccatcgatggcaccggcgcttcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGt                                                                                                                                              >  7:299360‑M1/148‑149 (MQ=255)       caccgtcatcctcaagccggcccaggccaacggcgaactgctggacgtggtggccatcgatggcaccggcgcttcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGTGcc                                                                                                                                           >  7:355496‑M1/144‑148 (MQ=255)       aaccgtcatcctcaacccggcccaggccaacgtcgaactgctggacgtggtggagatcgctggcaccggcgcttcgtacctgccggtgcaaatcgctgcgccagacatcacacctcctgtcaccccgagcgagctagctatcaGTGc                                                                                                                                            >  4:39885‑M1/144‑147 (MQ=255)            gATGTCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTCAA‑CCTGCGGGGGGTGGTGGGTGATGGTGAAACTGCCAGTGGCGGCGAACACCACACTACCCAGCCCGGTTTTGCCATcggcg                                                                                                                                    >  1:295913/1‑149 (MQ=255)            gATGTCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTA‑AGCCTGCGGGGGGTGGAGGGTGATGGTGAAAATTCCAGTGGCGTCGACCACCACACAACCCCGCACGGTAGTGCCATcggcg                                                                                                                                    >  1:300263/1‑149 (MQ=255)                tCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAg                                                                                                                               <  7:49215/149‑1 (MQ=255)                   ccggccgTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTTGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGcac                                                                                                                            <  6:331796/149‑1 (MQ=255)                                 gtTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCGAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGtgctgc                                                                                                              >  6:82428/1‑149 (MQ=255)                                     ccGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCAc                                                                                                          <  8:131477/149‑1 (MQ=255)                                             gTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGgcgc                                                                                                  >  3:209134/1‑149 (MQ=255)                                                          aCTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTc                                                                                     >  4:310699/1‑149 (MQ=255)                                                            ttGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGc                                                                                   >  2:330452/1‑149 (MQ=255)                                                             catcgatggcaccggcgcttcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCg                                                                                    <  5:290370‑M1/60‑1 (MQ=255)                                                                   aCCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGtt                                                                            >  5:150821/1‑149 (MQ=255)                                                                     ctctCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTgg                                                                          >  4:102343/1‑149 (MQ=255)                                                                       ctcCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCa                                                                        >  3:340084/1‑149 (MQ=255)                                                                          cACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCAc                                                                       <  1:230275/147‑1 (MQ=255)                                                                          cACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCAc                                                                       >  2:230275/1‑147 (MQ=255)                                                                          cACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTAGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCa                                                                        <  2:300263/146‑1 (MQ=255)                                                                          cACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTAGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCa                                                                        <  2:295913/146‑1 (MQ=255)                                                                           gcgctgcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACt                                                                      >  7:261863‑M1/76‑149 (MQ=255)                                                                            cgcttcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTg                                                                     >  6:290370‑M1/75‑149 (MQ=255)                                                                                        gcggGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcg                                                         >  6:90830/1‑149 (MQ=255)                                                                                          gggTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcgct                                                       >  3:262385/1‑149 (MQ=255)                                                                                             tCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCgg                                                    >  7:338976/1‑149 (MQ=255)                                                                                                          tGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTa                                                              <  5:60570/126‑1 (MQ=255)                                                                                                          tGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTa                                                              >  6:60570/1‑126 (MQ=255)                                                                                                          tGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCggg                                       >  5:18560/1‑149 (MQ=255)                                                                                                           gAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcgctc                                                      >  7:5808/1‑133 (MQ=255)                                                                                                           gAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcgctc                                                      <  8:5808/133‑1 (MQ=255)                                                                                                            aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCgggg                                      <  4:340084/148‑1 (MQ=255)                                                                                                            aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCggg                                       <  8:338976/147‑1 (MQ=255)                                                                                                            aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGt                                     <  3:102343/149‑1 (MQ=255)                                                                                                            aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGt                                     <  4:209134/149‑1 (MQ=255)                                                                                                                    aGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTg                             <  5:90830/149‑1 (MQ=255)                                                                                                                    aGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTg                             <  4:262385/149‑1 (MQ=255)                                                                                                                     gTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTgg                            <  6:150821/149‑1 (MQ=255)                                                                                                                      tGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGgc                           <  3:310699/149‑1 (MQ=255)                                                                                                                          gTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAg                       >  1:155413/1‑149 (MQ=255)                                                                                                                                caccacACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGAttt                 >  5:225300/1‑149 (MQ=255)                                                                                                                                 accacACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACACACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTg                <  8:76593/149‑1 (MQ=255)                                                                                                                                        tACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCgg          >  3:171490/1‑148 (MQ=255)                                                                                                                                           ccAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAgg      >  7:129385/1‑149 (MQ=255)                                                                                                                                            cAGCACGGTGGTGCCATCGTCTGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCTTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAggg     <  4:287666/149‑1 (MQ=255)                                                                                                                                                aCGGTGGTGCCATCGGCGGCCAGCACATGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACg  >  1:227549/1‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                              TCCGGCGCGGTGATGTCGCCGGCCGTGGAGGTGTTGCCGGCGGCGTCGGTGGCGGTGACTTGTAGTACCTCTCCACTC‑A‑CCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACG  >  NC_002947/938462‑938750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.