New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	938609 =	39 (0.660)	3 (0.050)	3/246	NT	6.7%	coding (7013/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	938682 =	46 (0.820)					coding (6940/18933 nt)	PP_0806	surface adhesion protein

CCACTCACCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGGT  >  NC_002947/938534‑938829                                                                                                                                                     |                                                                                                                                                    gcgctgcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACt                                                                                                                                                     >  7:261863‑M1/76‑149 (MQ=255)  cgcttcgtccctgccggtgcaaatcgctgcgccagacatcaccccgccggtcaccccgagcgagctagcgatcaGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTg                                                                                                                                                    >  6:290370‑M1/75‑149 (MQ=255)              gcggGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcg                                                                                                                                        >  6:90830/1‑149 (MQ=255)                gggTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcgct                                                                                                                                      >  3:262385/1‑149 (MQ=255)                   tCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCgg                                                                                                                                   >  7:338976/1‑149 (MQ=255)                                tGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTa                                                                                                                                             >  6:60570/1‑126 (MQ=255)                                tGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTa                                                                                                                                             <  5:60570/126‑1 (MQ=255)                                tGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCggg                                                                                                                      >  5:18560/1‑149 (MQ=255)                                 gAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcgctc                                                                                                                                     <  8:5808/133‑1 (MQ=255)                                 gAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAgctcgctc                                                                                                                                     >  7:5808/1‑133 (MQ=255)                                  aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCgggg                                                                                                                     <  4:340084/148‑1 (MQ=255)                                  aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCggg                                                                                                                      <  8:338976/147‑1 (MQ=255)                                  aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGt                                                                                                                    <  3:102343/149‑1 (MQ=255)                                  aaaCTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGt                                                                                                                    <  4:209134/149‑1 (MQ=255)                                          aGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTg                                                                                                            <  5:90830/149‑1 (MQ=255)                                          aGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTg                                                                                                            <  4:262385/149‑1 (MQ=255)                                           gTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTgg                                                                                                           <  6:150821/149‑1 (MQ=255)                                            tGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGgc                                                                                                          <  3:310699/149‑1 (MQ=255)                                                gTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAg                                                                                                      >  1:155413/1‑149 (MQ=255)                                                      caccacACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGAttt                                                                                                >  5:225300/1‑149 (MQ=255)                                                       accacACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACACACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTg                                                                                               <  8:76593/149‑1 (MQ=255)                                                              tACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCgg                                                                                         >  3:171490/1‑148 (MQ=255)                                                                 ccAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAgg                                                                                     >  7:129385/1‑149 (MQ=255)                                                                  cAGCACGGTGGTGCCATCGTCTGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCTTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAggg                                                                                    <  4:287666/149‑1 (MQ=255)                                                                      aCGGTGGTGCCATCGGCGGCCAGCACATGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACg                                                                                 >  1:227549/1‑148 (MQ=255)                                                                          cagtgccaacggcagcgaggtcaccggccgcgccgaagtgggcagcaccgtgcgtgtgctggccgccgatggcacTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAgcg                                                                            >  6:290370‑M2/76‑149 (MQ=255)                                                                           agtgccaacggcagcgaggtcaccggccgcgccgaagtgggcagcaccgtgcgtgtgctggccgccgatggcacTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGCAgcgc                                                                           >  7:261863‑M2/75‑149 (MQ=255)                                                                                 ATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGc                                                                     <  4:271511‑M1/149‑1 (MQ=255)                                                                                 ATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGc                                                                     <  2:90631‑M1/149‑1 (MQ=255)                                                                                    ggcggcCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCa                                                                   <  6:225300/148‑1 (MQ=255)                                                                                    ggcggcCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCAt                                                                  <  3:271511/149‑1 (MQ=255)                                                                                     gcggcCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATc                                                                 >  7:13029/1‑149 (MQ=255)                                                                                       ggcCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGc                                                                                                                                               >  7:201688/1‑69 (MQ=255)                                                                                       ggcCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGc                                                                                                                                               <  8:201688/69‑1 (MQ=255)                                                                                         cgaggtcaccggccgcgccgaagtgggcagcaccgtgcgtgtgctggccgccgatggcacTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATg                                                             <  5:290370‑M2/89‑1 (MQ=255)                                                                                         ccAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGt                                                                                                                                <  1:177355/82‑1 (MQ=255)                                                                                         ccAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGt                                                                                                                                >  2:177355/1‑82 (MQ=255)                                                                                         ccAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATg                                                             <  4:171490/149‑1 (MQ=255)                                                                                          cAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATgg                                                            >  8:252338/1‑149 (MQ=255)                                                                                            gCACACGCACGGTGCTGCCCACTTCCGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGcc                                                          <  8:13029/149‑1 (MQ=255)                                                                                             cacaCGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGcca                                                         >  8:253409/1‑149 (MQ=255)                                                                                                acgcacgGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGccacca                                                      >  5:95977/1‑149 (MQ=255)                                                                                                  gcacgGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACg                                                    >  7:251341/1‑149 (MQ=255)                                                                                                      ggTGCTGCCCACTTCGGCACGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGt                                                   >  6:263967/1‑146 (MQ=255)                                                                                                      ggTGCTGCCCACTTCGGCACGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGt                                                   <  5:263967/146‑1 (MQ=255)                                                                                                              ccACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCg                                        <  7:253409/149‑1 (MQ=255)                                                                                                                aCTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGcc                                      >  7:98610/1‑149 (MQ=255)                                                                                                                             cGGTGACCTCGCTGACGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTgggac                         >  2:371775/1‑147 (MQ=255)                                                                                                                                    cTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGa                  <  7:252338/149‑1 (MQ=255)                                                                                                                                    cTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGa                  <  8:251341/149‑1 (MQ=255)                                                                                                                                     tCGCTGCCGTTGGCACTGATCGCTTGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAg                 >  7:95523/1‑149 (MQ=255)                                                                                                                                     tCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGtt                    >  8:199973/1‑146 (MQ=255)                                                                                                                                       gCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGa                  <  7:199973/146‑1 (MQ=255)                                                                                                                                              ttGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGt        >  4:96637/1‑149 (MQ=255)                                                                                                                                              ttGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGt        <  2:155413/149‑1 (MQ=255)                                                                                                                                                ggcacTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGCTTGAGGATGACGGTg       >  7:355496‑M2/6‑148 (MQ=255)                                                                                                                                                 gcacTGATAGCTAGCTCGCTCGGGGTGACAGGAGGTGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGTACGAAGCGCCGGTGCCAGCGATCTCCACCACGTCCAGCAGTTCGACGTTGGCCTGGGCCGGGTTGAGGATGACGgtt       >  4:39885‑M2/5‑146 (MQ=255)                                                                                                                                                   acTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAgg   >  7:299360‑M2/3‑149 (MQ=255)                                                                                                                                                    cTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGGt  <  8:299360‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CCACTCACCTGCGGCGGGTCGAGGGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGTTGGCCTGGGCCGGGTTGAGGATGACGGTGAAGGT  >  NC_002947/938534‑938829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.