New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1071578 =	55 (0.930)	4 (0.070)	3/248	NT	7.8%	coding (243/375 nt)	PP_0929	lipoprotein
	?	NC_002947	1071621 =	42 (0.740)					coding (200/375 nt)	PP_0929	lipoprotein

GGGCACCGCTTCCTACTACGGCTCGCGCCACCATGGCAAACGCACCGCCAGTGGCGAACCGTTCAACCAGCACGCCCTTACCGCCGCCCACCGCAGCCTGCCCTTCGGCACACGTGTGCGGGTGACCAACATGGCCAACCAGCGCAGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1071728‑1071578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtgCCGAAGGGCAGGCTGCGGTGGGCGGCGGTAAGGGCGTGCTGGTTGAACGGTTCGCCACTGGCGGTGCGTTTGCCATGGTGGCGCGAGCCGTAGTAGGAAGCGGTGCCCGTCTGG  >  NC_002947/1071621‑1071734                                                                                                                                                                                                                                                                           GGGCACCGCTTCCTACTACGGCTCGCGCCACCATGGCAAACGCACCGCCAGTGGCGAACCGTTCAACCAGCACGCCCTTACCGCCGCCCACCGCAGCCTGCCCTTCGGCACACGTGTGCGGGTGACCAACATGGCCAACCAGCGCAGTG                                                                                                                      >  2:306572/1‑149                                                                                                            GCACACGTGTGCGGGTGACCAACATGGCCAACCAGCGCAGTGTGCCGAAGGGCAGGCTGCGGTGGGCGGCGGTAAGGGCGTGCTGGTTGAACGGTTCGCCACTGGCGGTGCGTTTGCCATGGTGGCGCGAGCCGTAGTAGGAAGCGGTG           >  7:30089/1‑149                                                                                                             CACACGTGTGCGGGTGACCAACATGGCCAACCAGCGCAGTGTGCCGAAGGGCAGGCTGCGGTGGGCGGCGGTAAGGGCGTGCTGGTTGAACGGTTCGCCACTGGCGGTGCGTTTGCCATGGTGGCGCGAGCCGTAGTAGGAAGCGGTGC          >  4:1719/1‑149                                                                                                             CACACGTGTGCGGGTGACCAACATGGCCAACCAGCGCAGTGTGCCGAAGGGCAGGCTGCGGTGGGCGGCGGTAAGGGCGTGCTGGTTGAACGGTTCGCCACTGGCGGTGCGTTTGCCATGGTGGCGCGAGCCGTAGTAGGAAGCGGTGC          >  4:6993/1‑149                                                                                                                     TGCGGGTGACCAACATGGCCAACCAGCGCAGTGTGCCGAAGGGCAGGCTGCGGTGGGCGGCGGTAAGGGCGTGCTGGTTGAACGGTTCGCCACTGGCGGTGCGTTTGCCATGGTGGCGCGAGCCGTAGTAGGAAGCGGTGCCCGTCTGG  <  8:30089/149‑1                                                                                                                                                                                                                                                                           GGGCACCGCTTCCTACTACGGCTCGCGCCACCATGGCAAACGCACCGCCAGTGGCGAACCGTTCAACCAGCACGCCCTTACCGCCGCCCACCGCAGCCTGCCCTTCGGCACACGTGTGCGGGTGACCAACATGGCCAACCAGCGCAGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1071728‑1071578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtgCCGAAGGGCAGGCTGCGGTGGGCGGCGGTAAGGGCGTGCTGGTTGAACGGTTCGCCACTGGCGGTGCGTTTGCCATGGTGGCGCGAGCCGTAGTAGGAAGCGGTGCCCGTCTGG  >  NC_002947/1071621‑1071734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.