New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1437733	34 (0.580)	3 (0.050)	3/244	NT	9.2%	coding (300/927 nt)	prpA	4‑hydroxyproline epimerase
	?	NC_002947	= 1437768	27 (0.490)					coding (265/927 nt)	prpA	4‑hydroxyproline epimerase

CGCCATGGCCGGGCACGTCCACCGCAACCTGTTGGCGGTAGCGGTAGGAGGGCACGTTGGCGACGGTGATGGCGCCATCTTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1437579‑1437733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgtgcGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGGGCCTGATCACGCCCGGGGTGCACAAGATCGACACCCCGGTCGGCCAGGTCAGCGCCACCTTGCATGAAGATGGCGCCATCACCGTCGCCAACGTGCCCTCCTAC  <  NC_002947/1437768‑1437622                                                                                                                                                                                                                                                                                                                CGCCATGGCCGGGCACGTCCACCGCAACCTGTTGGCGGTAGCGGTAGGAGGGCACGTTGGCGACGGTGATGGCGCCATCTTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCC                                                                                                                                                           <  7:326638/149‑1    CATGGCCGGGCACGTCCACCGCAACCTGTTGGCGGTAGCGGTAGGAGGGCACGTTGGCGACGGTGATGGCGCCATCTTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATG                                                                                                                                                        <  6:322960/149‑1      TGGCCGGGCACGTCCACCGCAACCTGTTGGCGGTAGCGGTAGGAGGGCACGTTGGCGACGGTGATGGCGCCATCTTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATGTG                                                                                                                                                      <  6:109589/149‑1                                                  GGGCACGTTGGCGACGGTGATGGCGCCAGCTTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATGTGCGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGG                                                                                                          <  6:207669/149‑1                                                                                TTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATGTGCGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGGGC                                                                                                        >  3:220271/1‑121                                                                                TTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATGTGCGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGGGC                                                                                                        <  4:220271/121‑1                                                                                                                                                       TGTGCGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGGGCCTGATCACGCCCGGGGTGCACAAGATCGACACCCCGGTCGGCCAGGTCAGCGCCACCTTGCATGAAGATGGCGCCATCACCGTCGCCAACGTGCCCTCC     <  3:341035/149‑1                                                                                                                                                           CGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGGGCCTGATCACGCCCGGGGTGCACAAGATCGACACCCCGGTCGGCCAGGTCAGCGCCACCTTGCATGAAGATGGCGCCATCACCGTCGCCAACGTGCCCTCCTAC  <  5:113901/148‑1                                                                                                                                                                                                                                                                                                                CGCCATGGCCGGGCACGTCCACCGCAACCTGTTGGCGGTAGCGGTAGGAGGGCACGTTGGCGACGGTGATGGCGCCATCTTCATGCAAGGTGGCGCTGACCTGGCCGACCGGGGTGTCGATCTTGTGCACCCCGGGCGTGATCAGGCCCATGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1437579‑1437733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgtgcGGCCACGGCACCATCGGCCTGGTCGCCTCGCTACAGCACATGGGCCTGATCACGCCCGGGGTGCACAAGATCGACACCCCGGTCGGCCAGGTCAGCGCCACCTTGCATGAAGATGGCGCCATCACCGTCGCCAACGTGCCCTCCTAC  <  NC_002947/1437768‑1437622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.