| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1591794 | 57 (0.970) | 3 (0.050) | 3/244 | NT | 5.2% | coding (100/921 nt) | PP_1395 | AraC family transcriptional regulator |
| ? | NC_002947 | = 1591834 | 56 (1.010) | coding (60/921 nt) | PP_1395 | AraC family transcriptional regulator | |||||
CCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1591641‑1591794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgaGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCATCGATGACCTGTACCTGGTGCGTTACACCGAAAATGTACGTTCTGTACCCACCCTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGGCAGCAAAAGCC < NC_002947/1591834‑1591689 CCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATG < 7:216165/149‑1 GTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCC > 4:124411/1‑148 GTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCC > 8:91943/1‑148 TTGCTGCCCTGGGCAAGGATGCACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCA < 7:116460/148‑1 ACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGG > 3:52641/1‑123 ACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGG < 4:52641/123‑1 CCGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCATCGATGACCTGTACCTGGTGCGTTACACCGAAAATGTACGTTCTGTACCCACCCTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGGCAGCAAAAGC < 8:210280/149‑1 CGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCATCGATGACCTGTACCTGGTGCGTTACACCGAAAATGTACGTTTTGTACCCACCCTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGGCAGCAAAAGCC < 1:100982/149‑1 CGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCATCGATGACCTGTACCTGGTGCGTTACACCGAAAATGTACGTTCTGTACCCACCCTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGGCAGCAAAAGCC > 2:303722/1‑149 CGAGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCATCGATGACCTGTACCTGGTGCGTTACACCGAAAATGTACGTTCTGTACCCACACTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGG > 3:116009/1‑138 CGAGCGGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCTGCATCCGCCATCGATGACCTGTACCTGCTGCGTTACACCGAAAATGTACGTTCTGTACCCACCCTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGG < 4:116009/138‑1 CCATGTAATGCAGTGGGTCGTAGGCGTACTGCTCGTCACCCAGGAACAGGCTTTTGCTGCCCTGGGCAAGGATGCACAGGGCAGGCTGCGCCAGGGTGGGTACAGAACGTACATTTTCGGTGTAACGCACCAGGTACAGGTCATCGATGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1591641‑1591794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgaGCTGATCAACCGCCATGCGGGCGAGCCCTTTGGTCCAGCATCGGCCATCGATGACCTGTACCTGGTGCGTTACACCGAAAATGTACGTTCTGTACCCACCCTGGCGCAGCCTGCCCTGTGCATCCTTGCCCAGGGCAGCAAAAGCC < NC_002947/1591834‑1591689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |