| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2357050 = | 94 (1.600) | 5 (0.090) | 5/238 | NT | 5.1% | coding (328/387 nt) | PP_2071 | hypothetical protein |
| ? | NC_002947 | 2357122 = | 98 (1.810) | coding (256/387 nt) | PP_2071 | hypothetical protein | |||||
GCATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2357203‑2357050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcggggcaCCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGGT > NC_002947/2357122‑2357268 GCATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCG < 4:138151/149‑1 ATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGG < 7:14797/149‑1 CCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAA > 3:88579/1‑149 CCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAAT > 4:340736/1‑149 CCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATG > 5:318861/1‑149 GCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTC < 4:88579/149‑1 ATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGAT < 3:340736/149‑1 CCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCCCCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTT > 1:134937/1‑149 GCGGGGCACCACAAAGAGTTCCCCGGGCTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCAACAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCACATGAATTCGCCTTCGATGCGCACGACCTTG > 5:308513/1‑148 CGGGTCACCACATTGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAA < 8:318474/149‑1 CGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAA < 8:323381/149‑1 GGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAAC < 6:15256/149‑1 GGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAAC < 6:72621/149‑1 GGGGCACCACATAGAGTTCCCCGGGGTTCACATACACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAAC < 7:311272/149‑1 GGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAAC < 3:25601/147‑1 GCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGCTACGCAGGGTGACTTCCAGCACCAGGAATGCTTGGTGGGTCTCCGGGTGCGCGTGCCACATGAATTAGCCTTCGATGCGCACGACCTTGAAgagg > 2:99810/1‑145 CACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGGT < 5:332633/149‑1 CACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGGT < 4:15891/149‑1 CACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGG > 7:64240/1‑148 GCATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2357203‑2357050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcggggcaCCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGGT > NC_002947/2357122‑2357268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |