| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2899473 | 46 (0.780) | 3 (0.050) | 3/248 | NT | 7.0% | coding (1157/1374 nt) | PP_2553 | MFS transporter |
| ? | NC_002947 | = 2899506 | 36 (0.640) | coding (1124/1374 nt) | PP_2553 | MFS transporter | |||||
GCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2899323‑2899473‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacaTCGGCACCATGCTGACCGCCATGCTGCCCGCGCTGTTCGCAATGGTTGCCCCACCCGGCTCGGACAACATTCCGCTGGTAGTCGGTGGGCTGGCCTTCTTCATCACCGGCGTGTGTGCCCTGGCAGCCTACATTGCCCCGGAAA < NC_002947/2899506‑2899363 GCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAA < 3:206858/149‑1GCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAA < 7:14227/149‑1GCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGA < 7:231008/148‑1 GTCCGGGTTGCCCAGCTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACA < 3:275393/149‑1 GTGGGTTTCCGGGGCAATGTAGACTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACATCGGCACCATGCTGACCGCCATGCTGCCCGCGC > 4:104214/1‑149 CGGGGCAATGTAGACTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACATCGGCACCATGCTGACCGCCATGCTGCCCGCGCTGTTCGCAA < 3:104214/149‑1 GGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACATCGGCACGATGCTGACCGCCATGCTGCCCGCGCTGTTCGCAAT < 1:55864/149‑1 GAACATCGGCACCATGCTGACCGCCATGCTGCCCGCGCTGTTCGCAATGGTTGCCCCACCCGGCTCGGACAACATTCCGCTGGTAGTCGGTGGGCTGGCCTTCTTCATCACCGGCGTGTGTGCCCTGGCAGCCTACATTGCCCCGGAAA < 3:162472/149‑1 GCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2899323‑2899473‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacaTCGGCACCATGCTGACCGCCATGCTGCCCGCGCTGTTCGCAATGGTTGCCCCACCCGGCTCGGACAACATTCCGCTGGTAGTCGGTGGGCTGGCCTTCTTCATCACCGGCGTGTGTGCCCTGGCAGCCTACATTGCCCCGGAAA < NC_002947/2899506‑2899363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |