New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2899473	46 (0.780)	3 (0.050)	3/248	NT	7.0%	coding (1157/1374 nt)	PP_2553	MFS transporter
	?	NC_002947	= 2899506	36 (0.640)					coding (1124/1374 nt)	PP_2553	MFS transporter

TTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAACGCCATTGGCACGTTCTGGATGC  >  NC_002947/2899363‑2899653                                                                                                                                                |                                                                                                                                                    tttCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGAtgttc                                                                                                                                                <  3:162472‑M2/149‑6 (MQ=255)          cAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATg                                                                                                                                       >  8:62932/1‑149 (MQ=255)          cAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATg                                                                                                                                       <  6:326980/149‑1 (MQ=255)                         gggCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAAcg                                                                                                                        <  4:11332/149‑1 (MQ=255)                             acacacGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCgg                                                                                                                     >  3:250303/1‑148 (MQ=255)                                       gTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGAGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGtgtg                                                                                                          <  7:303683/149‑1 (MQ=255)                                        tgatgaAGAAGGCCAGCCCACCGACTCCCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGAAGCGGgtgt                                                                                                           <  7:146674/147‑1 (MQ=255)                                        tgatgaAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGtgtg                                                                                                          >  5:378828/1‑148 (MQ=255)                                          atgaAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGaa                                                                                                       >  1:290652/1‑149 (MQ=255)                                           tgaAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAAc                                                                                                      <  4:250303/149‑1 (MQ=255)                                               gaagGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGct                                                                                                  >  4:74065/1‑149 (MQ=255)                                                  ggCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTg                                                                                               >  1:361537/1‑149 (MQ=255)                                                   gCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTgg                                                                                              <  2:290652/149‑1 (MQ=255)                                                        cccACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGa                                                                                         <  8:169422/149‑1 (MQ=255)                                                         ccACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGaa                                                                                        <  7:62932/149‑1 (MQ=255)                                                          cACCGTCTACCAGCGGAATGTTGTCCGAGCCGGTTGGTGCAAGCATTGCGAACATCGCGGGCATCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGTTAACGCGGTAGCGGGTGTGGAACAGCTATGGGtt                                                                                           <  4:117726/145‑2 (MQ=255)                                                          cACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTa                                                                                           >  3:117726/1‑145 (MQ=255)                                                          cACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAg                                                                                       <  6:378828/149‑1 (MQ=255)                                                                cTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTggg                                                                                 <  4:162472/149‑1 (MQ=255)                                                                    cAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGCCGGTCAGCAAGGTGCCGATGTTCTGCGCTATGGCCATCGCGGTAACGAGGTAGCGGGTGTGGAACAGCTCTGGTTAGAAGCTTGGTAaca                                                                             >  4:36509/1‑149 (MQ=255)                                                                     aGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAacac                                                                            >  5:180289/1‑149 (MQ=255)                                                                         gAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACcgcg                                                                        >  2:240405/1‑149 (MQ=255)                                                                              ttgtCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTgg                                                                                  <  3:367923/134‑1 (MQ=255)                                                                              ttgtCCGAGCCGGGTCGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTgg                                                                                  >  4:367923/1‑134 (MQ=255)                                                                                 tCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAACATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTa                                                                                                                   <  8:298265/98‑1 (MQ=255)                                                                                 tCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAACATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTa                                                                                                                   >  7:298265/1‑98 (MQ=255)                                                                                     aGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTgg                                                            <  5:146971/149‑1 (MQ=255)                                                                                       ccGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTa                                                          <  3:74065/149‑1 (MQ=255)                                                                                         gggTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGa                                                        >  4:69662/1‑149 (MQ=255)                                                                                               ggCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGc                                                  >  1:189455/1‑149 (MQ=255)                                                                                               ggCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGc                                                  >  7:190067/1‑149 (MQ=255)                                                                                                gCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGt                                                                    >  6:369152/1‑130 (MQ=255)                                                                                                gCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGt                                                                    <  5:369152/130‑1 (MQ=255)                                                                                                      aTTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATCGTGCCGAtgttcgcaatggttgccccacccggctcggacaacattccgctggtagtcggtgggctggccttcttcatcaccggcgtgtgtgccctggcagcctacattgcccc                                           <  1:55864‑M2/149‑107 (MQ=255)                                                                                                       ttGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGAtgttcgcaatggttgccccacccggctcggacaacattccgctggtagtcggtgggctggccttcttcatcaccggcgtgtgtgccctggcagtctacattgccccg                                          <  3:104214‑M2/149‑108 (MQ=255)                                                                                                                gcgcGGGCAGCATGGCGGTCAGCATGGTGCCGAtgttcgcaatggttgccccacccggctcggacaacattccgctggtagtcggtgggctggccttcttcatcaccggcgtgtgtgccctggcagtctacattgccccggaaacccac                                 >  4:104214‑M2/1‑33 (MQ=255)                                                                                                                    gggCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCcg                             <  7:197350/149‑1 (MQ=255)                                                                                                                             ggCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAAc                        <  7:133872/145‑1 (MQ=255)                                                                                                                             ggCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAAc                        >  8:133872/1‑145 (MQ=255)                                                                                                                                    aGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAACGCCATTGGCAc             <  2:189455/149‑1 (MQ=255)                                                                                                                                            gCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGTCGATCGAGGCCGCGAACGCCATTGGCACGTTCTGGa     >  4:105577/1‑149 (MQ=255)                                                                                                                                             ccGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAACGCCATTGGCACGTTCTGGAt    >  4:197567/1‑149 (MQ=255)                                                                                                                                               gATGTTCTGCTCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAACGCCATTGGCACGTTCTGGATGc  <  3:36509/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                    TTTCCGGGGCAATGTAGGCTGCCAGGGCACACACGCCGGTGATGAAGAAGGCCAGCCCACCGACTACCAGCGGAATGTTGTCCGAGCCGGGTGGGGCAACCATTGCGAACAGCGCGGGCAGCATGGCGGTCAGCATGGTGCCGATGTTCTGCGCGATGGCCATGGCGGTAACGCGGTAGCGGGTGTGGAACAGCTCTGGGTAGAAGCTTGGGAACACCGCGTTGTAACCCTGGTAGACCATGCCCCACATGACGATCGAGGCCGCGAACGCCATTGGCACGTTCTGGATGC  >  NC_002947/2899363‑2899653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.