New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2986914 | 25 (0.420) | 3 (0.050) | 3/242 | NT | 12.1% | coding (1485/2991 nt) | PP_2612 | membrane protein |
? | NC_002947 | 4109619 = | 20 (0.360) | coding (1441/2991 nt) | PP_3616 | membrane protein |
CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2986761‑2986914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgccgTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTG > NC_002947/4109619‑4109759 CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGG < 1:261670/149‑1 CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGG > 6:145315/1‑149 ACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAG < 5:271839/149‑1 CACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCA > 7:318570/1‑146 CACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCA < 8:318570/146‑1 GGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTG < 1:204773/148‑1 CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2986761‑2986914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgccgTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTG > NC_002947/4109619‑4109759 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |