New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3616748 =	45 (0.760)	3 (0.050)	3/244	NT	6.8%	coding (1083/1266 nt)	codB	cytosine transporter
	?	NC_002947	3616788 =	40 (0.720)					coding (1123/1266 nt)	codB	cytosine transporter

ATAGGCAAACAGCCCGGTGAGGTTGTAGCGAGGCAGGTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3616790‑3616748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgccTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCCGCGCGCCGGGCCAGGCGGGCGTCGAGCCGTGAGCCT  >  NC_002947/3616788‑3616935                                                                                                                                                                                                 ATAGGCAAACAGCCCGGTGAGGTTGTAGCGAGGCAGGTTTGCCTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCAC                                            >  5:165144/1‑149  TAGGCAAACAGCCCGGTGAGGTTGTAGCGAGGCAGGTTTGCCTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACG                                           >  7:42857/1‑149       AAACAGCCCGGTGAGGTTGTAGCGAGGCAGGTTTGCCTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCC                                      <  6:165144/149‑1                                      TTTGCCTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCCGCGCGCCGGGCCAGGCGGGCGTCGAGCCGT        <  6:374293/148‑1                                      TTTGCCTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCCGCGCGCCGGGCCAGGCGGGCGTCGAGCCGT        >  7:163490/1‑148                                        TGCCTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCCGCGCGCCGGGCCAGGCGGGCGTCGAGCCGTGA      <  6:77110/148‑1                                           CTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCCGCGCGCCGGGCCAGGCGGGCGTCGAGCCGTGAGCCT  <  2:158100/149‑1                                                                                                                                                                                                 ATAGGCAAACAGCCCGGTGAGGTTGTAGCGAGGCAGGTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3616790‑3616748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgccTATGCCGTGGGCGCTGTACTGGCCTATGCCTCACCGTGGGTCGCGCCGCTGGTGGGCATCGCCGCCTCGGCAGTGTGCTACATCGTCATTCTGGAGCTGGGCGCACGCCGCCGCGCGCCGGGCCAGGCGGGCGTCGAGCCGTGAGCCT  >  NC_002947/3616788‑3616935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.