New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3911555	43 (0.730)	4 (0.070)	4/244	NT	8.4%	intergenic (+25/‑100)	PP_3451/PP_3452	hypothetical protein/GGDEF domain‑containing protein
	?	NC_002947	= 3911606	47 (0.840)					intergenic (+76/‑49)	PP_3451/PP_3452	hypothetical protein/GGDEF domain‑containing protein

GTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3911422‑3911555 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcggGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGAGGCCGGCCCTGGTAATTCATTGCTGTGGCAAGATACCCCGGGCCCAGGGCCGGTAGCGCAAGGCAAACACTGCCTCGGCATGGC  <  NC_002947/3911606‑3911463                                                                                                                                                                                                                                                                                        GTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTA                                                                                                                                   >  1:122071/1‑149                                 GTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGT                                                                                                   <  2:122071/149‑1                                                                       TACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGA                                                                                      <  1:154649/124‑1                                                                       TACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGA                                                                                      >  2:154649/1‑124                                                                                                                                TTCGCGGGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGAGGCCGGCCCTGGTAATTCATTGCTGTGGCAAGATACCCCGGGCCCAGGGCCGGTAGCGCAAGGCAAACACTGCCTCGGCATG    >  7:47715/1‑149                                                                                                                                 TCGCGGGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGAGGCCGGCCCTGGTAATTCATTGCTGTGGCAAGATACCCCGGGCCCAGGGCCGGTAGCGCAAGGCAAACACTGCCTCGGCAT     <  6:217115/147‑1                                                                                                                                  CGCGGGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGAGGCCGGCCCTGGTAATTCATTGCTGTGGCAAGATACCCCGGGCCCAGGGCCGGTAGCGCAAGGCAAACACTGCCTCGGCATGGC  >  7:267892/1‑149                                                                                                                                                                                                                                                                                        GTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3911422‑3911555 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcggGTAAACCCGCTCCTACAGGGACCGTACGGTGTGGGGGACCTGTGGGTTTATCCGCGAAGAGGCCGGCCCTGGTAATTCATTGCTGTGGCAAGATACCCCGGGCCCAGGGCCGGTAGCGCAAGGCAAACACTGCCTCGGCATGGC  <  NC_002947/3911606‑3911463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.