New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4734867 | 47 (0.800) | 3 (0.050) | 3/250 | NT | 5.9% | coding (768/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
? | NC_002947 | = 4734922 | 50 (0.880) | coding (713/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
CCCTGGTGATACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4734718‑4734867 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGCGAGAGCCTGATTCCGATGCTGGATGAAATGATCCAGCGTTCCGGCTCTTACGGCGCCAAGGAGGTCGTGATCGGCATGGCCCACCGTGGCCGCCTGAACGTGCTGGTGAACACCTTCGGCAAGAACCCGCGCGAGCTGTTCGACGA < NC_002947/4734922‑4734775 caCTGGTGATACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGACGAAGGTGTTCAACAGCACGTTCAGGAGGACACGGTGGGCCATGCCGAACACGAACTCCTTGGC > 4:361487/3‑149 gtaaaTCGTGGAAGAGCTGGGGGGGGTTGTTGCCGACGGTGTTCACGAGCACGTTCAGGCGGCCACGGTGGGCCTTGCCGATCACGACCTCCTTGGCGGGGAGAGCCTGATTCCGATGCTGGATGAAATGATCCAGCGTTCCGGCTCT < 5:287589/143‑1 ACTCGTCGAACAGCTCCCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATCCCGATCACGACCTCCTTGGCGGCGAGAGCCTGATTCCGATCCTGCATGAAATGATCCAGCGTTCCGGCTCTTAa > 6:287589/1‑147 catCTCGCTCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGTTGGGGCATGCCGATCAGCACCTCCTTGGCGGCGAGAGGCTGATTCCGATGCTGGATTAAATGATCCAGCGTTCCGGCTCTTACGGCGCCAAGGA < 8:226497/146‑1 GGCGGCGAGAGCCTGATTCCGATGCTGGATGAAATGATCCAGCGTTCCGGCTCTTACGGCGCCAAGGAGGTCGTGATCGGCATGGCCCACCGTGGCCGCCTGAACGTGCTGGTGAACACCTTCGGCAAGAACCCGCGCGAGCTGTTCGA < 8:33989/149‑1 GGCGAGAGCCTGATTCCGATGCTGGATGAAATGATCCAGCGTTCCGGCTCTTACGGCGCCAAGGAGGTCGTGATCGGCATGGCCCACCGTGGCCGCCTGAACGTGCTGGTGAACACCTTCGGCAAGAACCCGCGCGAGCTGTTCGACGA < 4:194077/149‑1 GGCGAGAGCCTGATTCCGATGCTGGATGAAATGATCCAGCGTTCCGGCTCTTACGGCGCCAAGGAGGTCGTGATCGGCATGGCCCACCGTGGCCGCCTGAACGTGCTGGTGAACACCTTCGGCAAGAACCCGCGCGAGCTGTTCGACGA < 8:172785/149‑1 CCCTGGTGATACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4734718‑4734867 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGCGAGAGCCTGATTCCGATGCTGGATGAAATGATCCAGCGTTCCGGCTCTTACGGCGCCAAGGAGGTCGTGATCGGCATGGCCCACCGTGGCCGCCTGAACGTGCTGGTGAACACCTTCGGCAAGAACCCGCGCGAGCTGTTCGACGA < NC_002947/4734922‑4734775 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |