New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4734867 | 47 (0.800) | 3 (0.050) | 3/250 | NT | 5.9% | coding (768/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
? | NC_002947 | = 4734922 | 50 (0.880) | coding (713/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
GTGATACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCTCGAGCAGGTGGG > NC_002947/4734723‑4735015 | gTGATACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGt < 2:218831/149‑1 (MQ=255) tACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTAACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTaa > 3:72996/1‑147 (MQ=255) cACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTGCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGcc < 1:120434/147‑1 (MQ=255) aTCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCAt > 5:337081/1‑149 (MQ=255) cttGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCg < 6:337081/146‑1 (MQ=255) ttGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAAt > 7:316479/1‑149 (MQ=255) gCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATc < 6:96101/148‑1 (MQ=255) cTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAgg < 4:299445/149‑1 (MQ=255) cTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAgg > 2:68387/1‑149 (MQ=255) ttCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCt > 4:145192/1‑119 (MQ=255) ttCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCt < 3:145192/119‑1 (MQ=255) tCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGct > 5:58517/1‑149 (MQ=255) tCGAACTCGTCGAACAGCTCGCGCGGATTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGct > 1:194680/1‑149 (MQ=255) gtaaatcgtggaagagCTGGGGGGGGTTGTTGCCGACGGTGTTCACGAGCACGTTCAGGCGGCCACGGTGGGCCTTGCCGATCACGACCTCCTTGGCGgggagagcctgattccgatgctggatgaaatgatccagcgttccggctct < 5:287589‑M1/143‑51 (MQ=255) gAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGctct > 1:211970/1‑149 (MQ=255) aaCTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCtctc > 8:152263/1‑149 (MQ=255) aCTCGTCGAACAGCTCCCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATCCCGATCACGACCTCCTTGGCGgcgagagcctgattccgatcctgcatgaaatgatccagcgttccggctcttaa > 6:287589‑M1/1‑95 (MQ=255) tcgtcgAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCc < 8:172785‑M2/149‑2 (MQ=255) tcgtcgAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCc < 4:194077‑M2/149‑2 (MQ=255) tcgAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCcgcc < 8:33989‑M2/149‑5 (MQ=255) aaCAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCtt > 8:322895/1‑148 (MQ=255) catctcgctcgggtTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGTTGGGGCATGCCGATCAGCACCTCCTTGGCGgcgagaggctgattccgatgctggattaaatgatccagcgttccggctcttacggcgccaagga < 8:226497‑M1/146‑65 (MQ=255) cTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGc < 6:237233/149‑1 (MQ=255) cTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGc > 5:237233/1‑149 (MQ=255) gcgcgGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGcc < 3:361487/147‑1 (MQ=255) gcgGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAAt < 6:58517/149‑1 (MQ=255) gcgGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAAt < 2:194680/149‑1 (MQ=255) ggTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGc < 3:194077/149‑1 (MQ=255) cTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTg < 2:166313/148‑1 (MQ=255) ttGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCTAGGCCGAATCGCTTg > 3:22494/1‑147 (MQ=255) ttGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCTAGGCCGAATCGCTTg < 4:22494/147‑1 (MQ=255) ccGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGcc > 8:124587/1‑149 (MQ=255) cGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGccc < 7:322895/149‑1 (MQ=255) gAAGGTGTTCACCAGCACGTTCAGGCTGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCa < 7:120465/110‑1 (MQ=255) gAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCAAGCATCGGAATCa > 8:120465/1‑110 (MQ=255) aaGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTAGTGCCCgg > 4:147882/1‑149 (MQ=255) aCCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGt > 1:67985/1‑149 (MQ=255) aCCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGt < 7:172785/149‑1 (MQ=255) ttCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTAc < 8:108217/135‑1 (MQ=255) ttCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTAc > 7:108217/1‑135 (MQ=255) aGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACtt > 8:218587/1‑149 (MQ=255) gcCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCa < 8:316479/149‑1 (MQ=255) ccACGGTGGGCCATGCCGATCACGACCTCCATGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAg > 1:32153/1‑149 (MQ=255) ggTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGccc < 2:211970/149‑1 (MQ=255) ccATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACcg < 1:68387/149‑1 (MQ=255) cGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGtt < 2:67985/149‑1 (MQ=255) gATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTa > 3:50974/1‑149 (MQ=255) aTCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTAc > 8:71299/1‑149 (MQ=255) gACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCt > 3:349634/1‑149 (MQ=255) ctcctTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCTCGa < 7:218587/149‑1 (MQ=255) tcctTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGccc > 6:371872/1‑108 (MQ=255) tcctTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGccc < 5:371872/108‑1 (MQ=255) tcctTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTAATCCAGCATCGGAATCAGCCTCTCGCcgccaaggaggtgctgatcggcatgccccaacgtggccgcctgaacgtgctggtgaacaccttcggcaagaacccgagcgagatg < 8:226497‑M2/149‑86 (MQ=255) cctTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCTCGAg > 8:52637/1‑148 (MQ=255) ctTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCTCGAGCa < 4:349634/149‑1 (MQ=255) ggcggcgagagcctgattccgatgctggatgaaatgatccagcgttccggctcttacggcgccaaggaggtcgtgatcggcatggcccaccgtggccgcctgaacgtgctggtgaacaccttcggcaagaacccgcgcgagctgttcga < 8:33989‑M1/149‑146 (MQ=255) cgcCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCTCGAGCAGGTgg < 7:52637/149‑1 (MQ=255) ggcgagagcctgattccgatgctggatgaaatgatccagcgttccggctcttacggcgccaaggaggtcgtgatcggcatggcccaccgtggccgcctgaacgtgctggtgaacaccttcggcaagaacccgcgcgagctgttcgacga < 8:172785‑M1/149‑149 (MQ=255) ggcgagagcctgattccgatgctggatgaaatgatccagcgttccggctcttacggcgccaaggaggtcgtgatcggcatggcccaccgtggccgcctgaacgtgctggtgaacaccttcggcaagaacccgcgcgagctgttcgacga < 4:194077‑M1/149‑149 (MQ=255) | GTGATACTTCACGTCACCGGAGCCCAGCTCGTTCATCTTCTTGCCTTCGAACTCGTCGAACAGCTCGCGCGGGTTCTTGCCGAAGGTGTTCACCAGCACGTTCAGGCGGCCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCGCTCGAGCAGGTGGG > NC_002947/4734723‑4735015 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |