New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4963231 = | 51 (0.870) | 4 (0.070) | 4/246 | NT | 7.4% | coding (424/1218 nt) | fleS | two‑component system sensor histidine kinase FleS |
? | NC_002947 | 4963267 = | 51 (0.910) | coding (388/1218 nt) | fleS | two‑component system sensor histidine kinase FleS |
ATCGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4963381‑4963231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGC > NC_002947/4963267‑4963394 ATCGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGC < 6:374055/148‑1 ATCGTGATCGATGGGCTGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGC < 5:241130/148‑1 CCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGG > 3:248526/1‑87 CCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGG < 4:248526/87‑1 CGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCAC > 4:165701/1‑148 GCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGC < 3:165701/149‑1 ATCGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4963381‑4963231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGC > NC_002947/4963267‑4963394 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |