New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4963231 =	51 (0.870)	4 (0.070)	4/246	NT	7.4%	coding (424/1218 nt)	fleS	two‑component system sensor histidine kinase FleS
	?	NC_002947	4963267 =	51 (0.910)					coding (388/1218 nt)	fleS	two‑component system sensor histidine kinase FleS

AGGCAACCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCAC  >  NC_002947/4963084‑4963378                                                                                                                                                      |                                                                                                                                                    aGGCAACCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTcg                                                                                                                                                    >  5:11679/1‑149 (MQ=255)     aaCCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTcgcg                                                                                                                                                  >  5:124455/1‑147 (MQ=255)            cgcCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCgaga                                                                                                                                          <  3:11632/148‑1 (MQ=255)            cgcCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGGCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCgaga                                                                                                                                          <  3:6241/148‑1 (MQ=255)                ccAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCg                                                                                                                                     <  7:220375/149‑1 (MQ=255)                      gcctggcggggtgatcgtgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGc                                                                                                                                 <  3:165701‑M1/21‑1 (MQ=255)                        gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGTCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtc                                                                                                                             <  4:191061/149‑1 (MQ=255)                        gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtc                                                                                                                             >  4:240465/1‑149 (MQ=255)                        gacAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtc                                                                                                                             >  7:340184/1‑149 (MQ=255)                          cAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtcgt                                                                                                                           >  5:300722/1‑149 (MQ=255)                          cAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCcgtcgt                                                                                                                           >  5:305764/1‑149 (MQ=255)                            gCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTcc                                                                                                                         <  4:357360/149‑1 (MQ=255)                              cGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCtt                                                                                                                       >  3:254612/1‑149 (MQ=255)                                     ggCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                                >  6:141222/1‑149 (MQ=255)                                      gtgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGcgcg                                                                                                                  >  4:165701‑M1/113‑148 (MQ=255)                                          gCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTAGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTAGTGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                           >  6:230110/1‑149 (MQ=255)                                               cTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAAGCAGGTTGGCAAAC‑ACTGGAGGCGACCAACGACCAGCAACACTTCGTGGACGACGTCCTTCAGCGGCGCcaatca                                                                                                        >  1:300339/1‑145 (MQ=255)                                                 ggTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACgg                                                                                                    >  5:248137/1‑149 (MQ=255)                                                  gTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACgg                                                                                                    <  6:124455/148‑1 (MQ=255)                                                   tCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGc                                                                                                  <  6:344112/149‑1 (MQ=255)                                                   tCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGc                                                                                                  <  6:11679/149‑1 (MQ=255)                                                        gAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCa                                                                                             >  3:31228/1‑149 (MQ=255)                                                         aGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCa                                                                                             <  4:31228/148‑1 (MQ=255)                                                           gCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCAcc                                                                                           <  4:254612/148‑1 (MQ=255)                                                                     tcagtcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACaa                                                                                >  7:97490/1‑149 (MQ=255)                                                                        gtcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTg                                                                             >  3:344655/1‑149 (MQ=255)                                                                        gtcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTg                                                                             >  1:270739/1‑149 (MQ=255)                                                                         tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgg                                                                                                                 >  6:165153/1‑112 (MQ=255)                                                                         tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgg                                                                                                                 <  5:165153/112‑1 (MQ=255)                                                                         tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTgg                                                                            <  8:340184/149‑1 (MQ=255)                                                                             gTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                        >  2:62300/1‑149 (MQ=255)                                                                                   gAGCATCACCAATTCGCCAGGCTCTGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCAGTCGGCCTTGCGCGGGGCAAAGCTACTGGCGATCACCTGGCGCCACAATTGGCCGATCaga                                                                   <  2:44942/148‑1 (MQ=255)                                                                                     gcagcaCCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCTGAGGc                                                                <  3:240465/149‑1 (MQ=255)                                                                                         caCCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAc                                                            >  1:240584/1‑149 (MQ=255)                                                                                          aCCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAcc                                                           >  1:143179/1‑149 (MQ=255)                                                                                            cAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAcc                                                           >  1:15440/1‑147 (MQ=255)                                                                                                     cctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                                <  4:248526‑M1/38‑1 (MQ=255)                                                                                                     cctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                                >  3:248526‑M1/50‑87 (MQ=255)                                                                                                     aGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCg                                                 >  7:308602/1‑148 (MQ=255)                                                                                                      ggCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCa                                               <  2:270739/149‑1 (MQ=255)                                                                                                       gCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                        <  4:38955/123‑1 (MQ=255)                                                                                                       gCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                        >  3:38955/1‑123 (MQ=255)                                                                                                        cTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGAGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAgg                                             >  4:51385/1‑149 (MQ=255)                                                                                                                 cAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGt                                    <  4:344655/149‑1 (MQ=255)                                                                                                                  aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                   <  7:68781/149‑1 (MQ=255)                                                                                                                  aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                   >  2:353446/1‑149 (MQ=255)                                                                                                                  aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                   <  6:305764/149‑1 (MQ=255)                                                                                                                  aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                   <  6:300722/149‑1 (MQ=255)                                                                                                                   gTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTg                                  <  8:97490/149‑1 (MQ=255)                                                                                                                   gTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTg                                  >  2:80656/1‑149 (MQ=255)                                                                                                                        gC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCtt                              <  6:248137/149‑1 (MQ=255)                                                                                                                            ggTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGTGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTcgc                           <  5:141222/149‑1 (MQ=255)                                                                                                                               ggCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCa                        <  2:143179/149‑1 (MQ=255)                                                                                                                                  gATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAg                                              <  6:281889/124‑1 (MQ=255)                                                                                                                                  gATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAg                                              >  5:281889/1‑124 (MQ=255)                                                                                                                                        cAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCt               <  2:15440/149‑1 (MQ=255)                                                                                                                                          ggcggcGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGa             <  1:333928/149‑1 (MQ=255)                                                                                                                                                 aCCGTCGCGCAGCGAGACTTCGTGGCCGGCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATcga      <  2:300339/149‑1 (MQ=255)                                                                                                                                                   cGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATcgatc    <  3:51385/149‑1 (MQ=255)                                                                                                                                                   cGTCGCGCAGCGAGACTTCGTGGCAGTCGTCCTTTCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCATCTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGTCCCTGACCATcgatc    <  5:230110/149‑1 (MQ=255)                                                                                                                                                     tCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATcgatcac  <  1:62300/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AGGCAACCATGCGCCCCAACGACGACAGCCGCTCGTGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCAC  >  NC_002947/4963084‑4963378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.