New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4963231 =	51 (0.870)	4 (0.070)	4/246	NT	7.4%	coding (424/1218 nt)	fleS	two‑component system sensor histidine kinase FleS
	?	NC_002947	4963267 =	51 (0.910)					coding (388/1218 nt)	fleS	two‑component system sensor histidine kinase FleS

GGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTCTGC  >  NC_002947/4963120‑4963415                                                                                                                                                      |                                                                                                                                                      ggCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                                                                      >  6:141222/1‑149 (MQ=255)      gCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTAGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTAGTGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                                                                 >  6:230110/1‑149 (MQ=255)           cTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAAGCAGGTTGGCAAAC‑ACTGGAGGCGACCAACGACCAGCAACACTTCGTGGACGACGTCCTTCAGCGGCGCcaatca                                                                                                                                              >  1:300339/1‑145 (MQ=255)             ggTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACgg                                                                                                                                          >  5:248137/1‑149 (MQ=255)              gTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACgg                                                                                                                                          <  6:124455/148‑1 (MQ=255)               tCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGc                                                                                                                                        <  6:11679/149‑1 (MQ=255)               tCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGc                                                                                                                                        <  6:344112/149‑1 (MQ=255)                    gAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCa                                                                                                                                   >  3:31228/1‑149 (MQ=255)                     aGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCa                                                                                                                                   <  4:31228/148‑1 (MQ=255)                       gCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCAcc                                                                                                                                 <  4:254612/148‑1 (MQ=255)                                 tcagtcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACaa                                                                                                                      >  7:97490/1‑149 (MQ=255)                                    gtcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTg                                                                                                                   >  3:344655/1‑149 (MQ=255)                                    gtcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTg                                                                                                                   >  1:270739/1‑149 (MQ=255)                                     tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgg                                                                                                                                                       <  5:165153/112‑1 (MQ=255)                                     tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCgg                                                                                                                                                       >  6:165153/1‑112 (MQ=255)                                     tcagGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTgg                                                                                                                  <  8:340184/149‑1 (MQ=255)                                         gTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                                                              >  2:62300/1‑149 (MQ=255)                                               gAGCATCACCAATTCGCCAGGCTCTGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCAGTCGGCCTTGCGCGGGGCAAAGCTACTGGCGATCACCTGGCGCCACAATTGGCCGATCaga                                                                                                         <  2:44942/148‑1 (MQ=255)                                                 gcagcaCCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCTGAGGc                                                                                                      <  3:240465/149‑1 (MQ=255)                                                     caCCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAc                                                                                                  >  1:240584/1‑149 (MQ=255)                                                      aCCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAcc                                                                                                 >  1:143179/1‑149 (MQ=255)                                                        cAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAcc                                                                                                 >  1:15440/1‑147 (MQ=255)                                                                 cctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                                                                      >  3:248526‑M1/50‑87 (MQ=255)                                                                 cctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCggg                                                                                                                                                      <  4:248526‑M1/38‑1 (MQ=255)                                                                 aGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCg                                                                                       >  7:308602/1‑148 (MQ=255)                                                                  ggCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCa                                                                                     <  2:270739/149‑1 (MQ=255)                                                                   gCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                                                              <  4:38955/123‑1 (MQ=255)                                                                   gCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                                                              >  3:38955/1‑123 (MQ=255)                                                                    cTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGAGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAgg                                                                                   >  4:51385/1‑149 (MQ=255)                                                                             cAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGt                                                                          <  4:344655/149‑1 (MQ=255)                                                                              aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                                                         >  2:353446/1‑149 (MQ=255)                                                                              aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                                                         <  6:300722/149‑1 (MQ=255)                                                                              aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                                                         <  6:305764/149‑1 (MQ=255)                                                                              aGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGtt                                                                         <  7:68781/149‑1 (MQ=255)                                                                               gTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTg                                                                        <  8:97490/149‑1 (MQ=255)                                                                               gTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTg                                                                        >  2:80656/1‑149 (MQ=255)                                                                                    gC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCtt                                                                    <  6:248137/149‑1 (MQ=255)                                                                                        ggTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGTGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTcg‑c                                                                <  5:141222/149‑1 (MQ=255)                                                                                           ggCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCa                                                             <  2:143179/149‑1 (MQ=255)                                                                                              gATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAg                                                                                    <  6:281889/124‑1 (MQ=255)                                                                                              gATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAg                                                                                    >  5:281889/1‑124 (MQ=255)                                                                                                    cAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCt                                                    <  2:15440/149‑1 (MQ=255)                                                                                                      ggcggcGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGa                                                  <  1:333928/149‑1 (MQ=255)                                                                                                             aCCGTCGCGCAGCGAGACTTCGTGGCCGGCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcga                                           <  2:300339/149‑1 (MQ=255)                                                                                                               cGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatc                                         <  3:51385/149‑1 (MQ=255)                                                                                                               cGTCGCGCAGCGAGACTTCGTGGCAGTCGTCCTTTCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCATCTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGTCCCTGACCATcgatc                                         <  5:230110/149‑1 (MQ=255)                                                                                                                cccgcgcaaggacgacggccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAgg                                                                                                       >  3:248526‑M2/39‑87 (MQ=255)                                                                                                                cccgcgcaaggacgacggccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAgg                                                                                                       <  4:248526‑M2/49‑1 (MQ=255)                                                                                                                 tCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcac                                       <  1:62300/149‑1 (MQ=255)                                                                                                                  cgcgcaaggacgacggccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcac                                       >  4:165701‑M2/37‑148 (MQ=255)                                                                                                                     GCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcacgat                                    <  6:374055‑M1/148‑1 (MQ=255)                                                                                                                     GCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCAGCCCATcgatcacgat                                    <  5:241130‑M1/148‑1 (MQ=255)                                                                                                                         cGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcac                                       <  4:202598/141‑1 (MQ=255)                                                                                                                         cGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcac                                       >  3:202598/1‑141 (MQ=255)                                                                                                                                 gccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGgc                       <  3:165701‑M2/128‑1 (MQ=255)                                                                                                                                     gCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGCGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGgcagc                    >  8:274842/1‑148 (MQ=255)                                                                                                                                     gCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCCGCACCAGGCCCTGACCATcgatcac                                       <  1:193428/130‑1 (MQ=255)                                                                                                                                     gCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcac                                       >  2:193428/1‑129 (MQ=255)                                                                                                                                      ccGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCT‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCaa                  <  1:80656/149‑1 (MQ=255)                                                                                                                                       cgtcgtCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAg                 >  6:150676/1‑149 (MQ=255)                                                                                                                                        gtcgtcCTTGCGCGGGGCAAAGCTACGGACGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCaa                                                                                           <  1:81719/75‑1 (MQ=255)                                                                                                                                         tcgtcCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTc               >  3:144956/1‑149 (MQ=255)                                                                                                                                            tcCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcag            >  1:17444/1‑149 (MQ=255)                                                                                                                                            tcCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcag            <  8:308602/149‑1 (MQ=255)                                                                                                                                            tcCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTCGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcag            >  6:296569/1‑149 (MQ=255)                                                                                                                                              cTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcag            >  4:369458/1‑147 (MQ=255)                                                                                                                                              cTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcag            >  8:19485/1‑147 (MQ=255)                                                                                                                                               ttGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCaagcag         >  7:216824/1‑149 (MQ=255)                                                                                                                                               ttGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCACTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcagcag         >  3:293520/1‑149 (MQ=255)                                                                                                                                                      gggCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTCTGc  <  3:369458/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      GGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTG‑AGC‑GGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTCTGC  >  NC_002947/4963120‑4963415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.