| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5207694 | 63 (1.070) | 7 (0.130) | 6/232 | NT | 9.8% | intergenic (+32/+82) | PP_4588/PP_4589 | nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | NC_002947 | = 5207745 | 72 (1.360) | intergenic (+83/+31) | PP_4588/PP_4589 | nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
CATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5207534‑5207694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcggTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACTTC < NC_002947/5207745‑5207600 CATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGGGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTG < 7:97242/149‑1CATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTG > 5:334018/1‑149 TGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGC < 7:45088/149‑1 TGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGC > 3:45402/1‑149 CCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCC < 4:45402/148‑1 TGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGC < 2:51410/149‑1 GCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG < 2:19848/149‑1 GCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG < 7:208809/149‑1 GCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG < 7:181503/149‑1 GGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCA > 8:278461/1‑148 GGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAG‑CGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGG > 2:273952/1‑149 CCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAG < 8:12449/148‑1 CCGAGCCCGCGCAAG‑CGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAG < 1:273952/149‑1 CGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAG < 7:278461/149‑1 CCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG < 5:349151/84‑1 CCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG > 6:349151/1‑84 AAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCC < 2:239724/141‑1 AAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCC > 1:239724/1‑141 CTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACA > 4:198247/1‑98 TCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGTTACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGG > 5:74912/1‑149 TTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGG < 6:176485/147‑1 GCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGCGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACTT < 1:167468/149‑1 CGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACTTC > 3:229173/1‑149 CGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACTTC < 3:124371/149‑1 CATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5207534‑5207694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcggTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACTTC < NC_002947/5207745‑5207600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |