New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 520769463 (1.070)7 (0.130) 6/232 NT 9.8% intergenic (+32/+82) PP_4588/PP_4589 nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
?NC_002947 = 5207745 72 (1.360)intergenic (+83/+31) PP_4588/PP_4589 nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein

GAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTGGGCGCCGAGCTGTG  >  NC_002947/5207600‑5207892
                                                                                                                                                 |                                                                                                                                                   
gAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccg                                                                                                                                                  >  3:229173‑M2/1‑146 (MQ=255)
gAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccg                                                                                                                                                  <  3:124371‑M2/149‑4 (MQ=255)
 aaGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCGCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgc                                                                                                                                                 <  1:167468‑M2/149‑5 (MQ=255)
      ccGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaa                                                                                                                                              <  6:176485‑M2/147‑8 (MQ=255)
      ccGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTAACACCACCCTGTGCTAAAGCGGTTTTAccgcgaaga                                                                                                                                            >  5:74912‑M2/1‑140 (MQ=255)
           cccGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCg                                                                                                                                       <  4:124371/149‑1 (MQ=255)
            ccGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCgg                                                                                                                                      >  4:264588/1‑149 (MQ=255)
              gcgcAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTa                                                                                                                                    >  7:60310/1‑149 (MQ=255)
                   aGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGc                                                                                                                               <  4:249125/149‑1 (MQ=255)
                            gcgagcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGAt                                                                                                                      >  5:108730/1‑149 (MQ=255)
                              gagcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCa                                                                                                                    <  5:246493/149‑1 (MQ=255)
                               agcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCTGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAg                                                                                                                   <  4:85381/149‑1 (MQ=255)
                               agcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAg                                                                                                                   >  4:163290/1‑149 (MQ=255)
                                    gctgctGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAg                                                                                                                <  4:370436/147‑1 (MQ=255)
                                    gctgctGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGcc                                                                                                              >  2:202022/1‑149 (MQ=255)
                                    gctgccGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGcc                                                                                                              >  3:269439/1‑149 (MQ=255)
                                        ctgAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCgg                                                                                                          <  8:60310/149‑1 (MQ=255)
                                           aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCg                                                                                                                                       <  6:9577/117‑1 (MQ=255)
                                           aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCg                                                                                                                                       >  5:9577/1‑117 (MQ=255)
                                           aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGc                                                                                                        <  3:163290/148‑1 (MQ=255)
                                           aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGc                                                                                                        >  8:319770/1‑148 (MQ=255)
                                             ggCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGa                                                                                                      >  5:298837/1‑148 (MQ=255)
                                             ggCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGa                                                                                                      >  5:363185/1‑148 (MQ=255)
                                                gATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATc                                                                                                  <  5:176485/149‑1 (MQ=255)
                                                gATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATc                                                                                                  <  7:132379/149‑1 (MQ=255)
                                                gATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATc                                                                                                  <  4:310215/149‑1 (MQ=255)
                                                    tCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                                                                               <  6:108730/148‑1 (MQ=255)
                                                     cAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACt                                                                                              <  1:369416/148‑1 (MQ=255)
                                                        ccTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCAc                                                                                          <  6:363185/149‑1 (MQ=255)
                                                        ccTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCAc                                                                                          <  1:202022/149‑1 (MQ=255)
                                                         cTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGaa                                                                                                     <  6:130899/137‑1 (MQ=255)
                                                         cTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGaa                                                                                                     >  5:130899/1‑137 (MQ=255)
                                                          tGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTATAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                                                                               >  1:118157/1‑142 (MQ=255)
                                                          tGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagag                                                                                                                                           >  4:198247‑M2/1‑88 (MQ=255)
                                                          tGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                                                                               <  2:118157/142‑1 (MQ=255)
                                                           gTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                                                                               <  6:280872/141‑1 (MQ=255)
                                                           gTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                                                                               >  5:280872/1‑141 (MQ=255)
                                                            tAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCg                                                                                      >  2:95930/1‑149 (MQ=255)
                                                             aaGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCg                                                                                      >  3:136054/1‑148 (MQ=255)
                                                                gTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCCCCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGCCTACAcccccaaac                                                                                  >  4:100454/1‑144 (MQ=255)
                                                                gTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAAc                                                                                  >  6:220812/1‑149 (MQ=255)
                                                                gTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAAc                                                                                  >  8:306134/1‑149 (MQ=255)
                                                                          gCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGcccc                                                                         <  4:123129/148‑1 (MQ=255)
                                                                             gTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCtt                                                                     <  8:202395/149‑1 (MQ=255)
                                                                                cTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                                                                  <  4:269439/149‑1 (MQ=255)
                                                                                 tGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGCTCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                                                                  >  1:327030/1‑148 (MQ=255)
                                                                                 tGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                                                                  >  2:152309/1‑148 (MQ=255)
                                                                                  ggCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggctt                                                                        >  1:239724‑M2/1‑64 (MQ=255)
                                                                                  ggCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggctt                                                                        <  2:239724‑M2/141‑78 (MQ=255)
                                                                                     ctctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcg                                                             <  7:278461‑M2/149‑89 (MQ=255)
                                                                                     ctctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcgcttgcgcgggctcgg                                                             <  1:273952‑M2/149‑89 (MQ=255)
                                                                                     ctctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGcc                                                             >  2:27126/1‑149 (MQ=255)
                                                                                      tctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGccc                                                            >  2:138641/1‑149 (MQ=255)
                                                                                       ctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcgg                                                            <  8:12449‑M2/148‑90 (MQ=255)
                                                                                        ttCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCg                                                           >  3:165002/1‑148 (MQ=255)
                                                                                           gcgGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGcac                                                        <  5:220812/148‑1 (MQ=255)
                                                                                              ggCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATtc                                                    <  6:298837/149‑1 (MQ=255)
                                                                                               gCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATtct                                                   >  8:206233/1‑149 (MQ=255)
                                                                                                cAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCAcc                                                                                         >  7:319666/1‑110 (MQ=255)
                                                                                                cAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCAcc                                                                                         <  8:319666/110‑1 (MQ=255)
                                                                                                 aaGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATtctc                                                  >  6:10391/1‑148 (MQ=255)
                                                                                                  aGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCg                                                 >  3:74950/1‑148 (MQ=255)
                                                                                                   gCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGa                                                >  6:327816/1‑148 (MQ=255)
                                                                                                   gCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGa                                                >  6:333318/1‑148 (MQ=255)
                                                                                                      cGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGacaaa                                            >  7:250829/1‑149 (MQ=255)
                                                                                                       gCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGacaaac                                           <  1:152309/149‑1 (MQ=255)
                                                                                                           cTAGGGGGGTTTTCACAACCTTTTGCAAAAGGGGTTTTACCGGTATTTGGCCGTTAAAGGCGGAAGGTATATGAAGCCCCGGGCTAATTCTATTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAgc                                       <  1:95930/149‑1 (MQ=255)
                                                                                                           cTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGacaaacaa                                         <  5:10391/147‑1 (MQ=255)
                                                                                                           cTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAgc                                       >  5:125794/1‑149 (MQ=255)
                                                                                                           cTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAgc                                       <  4:136054/149‑1 (MQ=255)
                                                                                                           cTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACAGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAgc                                       >  4:68079/1‑149 (MQ=255)
                                                                                                              cGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAgcg                                      <  7:306134/147‑1 (MQ=255)
                                                                                                              aggggggTATAACCAACCTGTTCATAACGGGTTTTACCGCGTAGAGGGCGGGAAAGGGCGCAGGGTTGATTTTGCCCGGGCGTAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAgcg                                      <  3:100454/146‑1 (MQ=255)
                                                                                                                 ggggTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCAcc                                  >  4:81106/1‑148 (MQ=255)
                                                                                                                 ggggTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGACGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCa                                 <  3:81106/149‑1 (MQ=255)
                                                                                                                   ggTTTCACCACCCTGGGCTATAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATc                               <  2:167468/149‑1 (MQ=255)
                                                                                                                   ggTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATc                               <  7:319770/149‑1 (MQ=255)
                                                                                                                    gTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCACCCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCAACg                              >  8:307650/1‑149 (MQ=255)
                                                                                                                    gTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAACCAAGCGCACCATCg                              <  1:27126/149‑1 (MQ=255)
                                                                                                                     tATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                                                                  <  5:76502/112‑1 (MQ=255)
                                                                                                                     tATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                                                                  >  6:76502/1‑112 (MQ=255)
                                                                                                                      aTCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCt                            >  1:200980/1‑149 (MQ=255)
                                                                                                                         accaccCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACt                                                                                              >  2:225283/1‑80 (MQ=255)
                                                                                                                         accaccCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACt                                                                                              <  1:225283/80‑1 (MQ=255)
                                                                                                                         accaccCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTc                         <  2:200980/149‑1 (MQ=255)
                                                                                                                          ccaccCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcgcttgcgcgggctcggcacttcacgcgcctgcagggcttcatccaggctggcc                        >  2:273952‑M2/1‑24 (MQ=255)
                                                                                                                                  tgCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcggcacttcacgcgcctgcagggcttcatccaggctggccttgtcc                 >  8:278461‑M2/1‑16 (MQ=255)
                                                                                                                                    cTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTggg              >  8:212489/1‑149 (MQ=255)
                                                                                                                                          cGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTGGGCGCCGa        <  4:165002/149‑1 (MQ=255)
                                                                                                                                           ggTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTGGGCGCCGAg       <  3:264588/149‑1 (MQ=255)
                                                                                                                                                tACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTgg               <  2:355894/136‑1 (MQ=255)
                                                                                                                                                tACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTgg               >  1:355894/1‑136 (MQ=255)
                                                                                                                                                tACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTGGGCGCCGAGCtgt   <  8:250829/148‑1 (MQ=255)
                                                                                                                                                 aCCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTGGGCGCCGAGCtgtg  <  7:206233/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
GAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTCTCGACAAACAAGCGCACCATCGCTGTCGGCGAGGTGGGCGCCGAGCTGTG  >  NC_002947/5207600‑5207892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.