New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 520769463 (1.070)7 (0.130) 6/232 NT 9.8% intergenic (+32/+82) PP_4588/PP_4589 nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
?NC_002947 = 5207745 72 (1.360)intergenic (+83/+31) PP_4588/PP_4589 nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein

GCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTC  >  NC_002947/5207546‑5207842
                                                                                                                                                    |                                                                                                                                                    
gCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG                                                                                                                                                      <  7:181503‑M1/149‑1 (MQ=255)
gCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG                                                                                                                                                      <  2:19848‑M1/149‑1 (MQ=255)
gCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG                                                                                                                                                      <  7:208809‑M1/149‑1 (MQ=255)
      ggCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGc                                                                                                                                                <  6:169810/149‑1 (MQ=255)
               ggggACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTa                                                                                                                                       >  6:353057/1‑149 (MQ=255)
                 ggACAAGGTCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACg                                                                                                                                     >  8:132379/1‑149 (MQ=255)
                 ggACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagca                                                                                                                                      >  8:278461‑M1/1‑132 (MQ=255)
                 ggACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACg                                                                                                                                     >  3:343824/1‑149 (MQ=255)
                  gACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACgg                                                                                                                                    >  6:246493/1‑149 (MQ=255)
                     aaGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACggggg                                                                                                                                 <  6:334018/149‑1 (MQ=255)
                     aaGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACggggg                                                                                                                                 <  6:352329/149‑1 (MQ=255)
                     aaGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACggggg                                                                                                                                 >  3:123129/1‑149 (MQ=255)
                     aaGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACggggg                                                                                                                                 <  2:315570/149‑1 (MQ=255)
                       ggCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGc                                                                                                                                                >  7:223410/1‑132 (MQ=255)
                       ggCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGc                                                                                                                                                <  8:223410/132‑1 (MQ=255)
                       ggCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACgggggg                                                                                                                                >  3:370436/1‑148 (MQ=255)
                       ggCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACgggggg                                                                                                                                >  3:85381/1‑148 (MQ=255)
                       ggCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGt                                                                                                                               <  5:353057/149‑1 (MQ=255)
                       ggCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagcacagggtgg                                                                                                                              >  2:273952‑M1/1‑125 (MQ=255)
                         ccAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTaa                                                                                                                             >  6:74912/1‑148 (MQ=255)
                            gCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATcac                                                                                                                          >  3:249125/1‑149 (MQ=255)
                                         ccTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTa                                                                                                              >  7:202395/1‑148 (MQ=255)
                                             cAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCg                                                                                                         <  4:343824/149‑1 (MQ=255)
                                             cAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCg                                                                                                         >  2:369416/1‑149 (MQ=255)
                                                      gAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccg                                                                                                >  3:229173‑M2/1‑146 (MQ=255)
                                                      gAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccg                                                                                                <  3:124371‑M2/149‑4 (MQ=255)
                                                       aaGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCGCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgc                                                                                               <  1:167468‑M2/149‑5 (MQ=255)
                                                            ccGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaag                                                                                           <  8:12449‑M1/148‑60 (MQ=255)
                                                            ccGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaa                                                                                            <  6:176485‑M2/147‑8 (MQ=255)
                                                            ccGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTAACACCACCCTGTGCTAAAGCGGTTTTAccgcgaaga                                                                                          >  5:74912‑M2/1‑140 (MQ=255)
                                                            ccGAGCCCGCGCAAGCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagag                                                                                         <  1:273952‑M1/149‑62 (MQ=255)
                                                             cGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagag                                                                                         <  7:278461‑M1/149‑62 (MQ=255)
                                                                 cccGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCg                                                                                     <  4:124371/149‑1 (MQ=255)
                                                                 cccGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG                                                                                                                                                      >  6:349151‑M1/1‑84 (MQ=255)
                                                                 cccGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG                                                                                                                                                      <  5:349151‑M1/84‑1 (MQ=255)
                                                                  ccGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCgg                                                                                    >  4:264588/1‑149 (MQ=255)
                                                                    gcgcAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTa                                                                                  >  7:60310/1‑149 (MQ=255)
                                                                        aaGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagaggcc                                                                                      <  2:239724‑M1/141‑65 (MQ=255)
                                                                        aaGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagaggcc                                                                                      >  1:239724‑M1/1‑77 (MQ=255)
                                                                         aGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGc                                                                             <  4:249125/149‑1 (MQ=255)
                                                                                  gcgagcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGAt                                                                    >  5:108730/1‑149 (MQ=255)
                                                                                    gagcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCa                                                                  <  5:246493/149‑1 (MQ=255)
                                                                                     agcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCTGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAg                                                                 <  4:85381/149‑1 (MQ=255)
                                                                                     agcTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAg                                                                 >  4:163290/1‑149 (MQ=255)
                                                                                          gctgctGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAg                                                              <  4:370436/147‑1 (MQ=255)
                                                                                          gctgctGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGcc                                                            >  2:202022/1‑149 (MQ=255)
                                                                                          gctgccGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGcc                                                            >  3:269439/1‑149 (MQ=255)
                                                                                              ctgAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCgg                                                        <  8:60310/149‑1 (MQ=255)
                                                                                                 aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCg                                                                                     <  6:9577/117‑1 (MQ=255)
                                                                                                 aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCg                                                                                     >  5:9577/1‑117 (MQ=255)
                                                                                                 aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGc                                                      >  8:319770/1‑148 (MQ=255)
                                                                                                 aaGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGc                                                      <  3:163290/148‑1 (MQ=255)
                                                                                                   ggCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGa                                                    >  5:298837/1‑148 (MQ=255)
                                                                                                   ggCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGa                                                    >  5:363185/1‑148 (MQ=255)
                                                                                                      gATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATc                                                <  5:176485/149‑1 (MQ=255)
                                                                                                      gATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATc                                                <  4:310215/149‑1 (MQ=255)
                                                                                                      gATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATc                                                <  7:132379/149‑1 (MQ=255)
                                                                                                          tCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                             <  6:108730/148‑1 (MQ=255)
                                                                                                           cAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACt                                            <  1:369416/148‑1 (MQ=255)
                                                                                                              ccTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCAc                                        <  1:202022/149‑1 (MQ=255)
                                                                                                              ccTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCAc                                        <  6:363185/149‑1 (MQ=255)
                                                                                                               cTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGaa                                                   >  5:130899/1‑137 (MQ=255)
                                                                                                               cTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGaa                                                   <  6:130899/137‑1 (MQ=255)
                                                                                                                tGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTATAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                             >  1:118157/1‑142 (MQ=255)
                                                                                                                tGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagag                                                                                         >  4:198247‑M2/1‑88 (MQ=255)
                                                                                                                tGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                             <  2:118157/142‑1 (MQ=255)
                                                                                                                 gTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                             >  5:280872/1‑141 (MQ=255)
                                                                                                                 gTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGAc                                             <  6:280872/141‑1 (MQ=255)
                                                                                                                  tAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCg                                    >  2:95930/1‑149 (MQ=255)
                                                                                                                   aaGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCg                                    >  3:136054/1‑148 (MQ=255)
                                                                                                                      gTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCCCCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGCCTACAcccccaaac                                >  4:100454/1‑144 (MQ=255)
                                                                                                                      gTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAAc                                >  6:220812/1‑149 (MQ=255)
                                                                                                                      gTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAAc                                >  8:306134/1‑149 (MQ=255)
                                                                                                                                gCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGcccc                       <  4:123129/148‑1 (MQ=255)
                                                                                                                                   gTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCtt                   <  8:202395/149‑1 (MQ=255)
                                                                                                                                      cTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                <  4:269439/149‑1 (MQ=255)
                                                                                                                                       tGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGCTCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                >  1:327030/1‑148 (MQ=255)
                                                                                                                                       tGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCAt                >  2:152309/1‑148 (MQ=255)
                                                                                                                                        ggCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggctt                      >  1:239724‑M2/1‑64 (MQ=255)
                                                                                                                                        ggCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggctt                      <  2:239724‑M2/141‑78 (MQ=255)
                                                                                                                                           ctctTCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagaggccagcactgccaacacaaaccttaca                                                              >  4:198247‑M1/1‑10 (MQ=255)
                                                                                                                                           ctctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcg           <  7:278461‑M2/149‑89 (MQ=255)
                                                                                                                                           ctctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcgcttgcgcgggctcgg           <  1:273952‑M2/149‑89 (MQ=255)
                                                                                                                                           ctctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGcc           >  2:27126/1‑149 (MQ=255)
                                                                                                                                            tctTCGCGGtaaaaccgctttagcacagggtggtgttaccccccgtaggagcgggcttgcccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcgg          >  5:74912‑M1/1‑9 (MQ=255)
                                                                                                                                            tctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGccc          >  2:138641/1‑149 (MQ=255)
                                                                                                                                             ctTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTAccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcgg          <  8:12449‑M2/148‑90 (MQ=255)
                                                                                                                                              ttCGCGGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcgg          <  6:176485‑M1/147‑141 (MQ=255)
                                                                                                                                              ttCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCg         >  3:165002/1‑148 (MQ=255)
                                                                                                                                                 gcgGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgcgcttgcccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcggcactt     <  1:167468‑M1/149‑146 (MQ=255)
                                                                                                                                                 gcgGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGcac      <  5:220812/148‑1 (MQ=255)
                                                                                                                                                  cgGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcggcacttc    <  3:124371‑M1/149‑147 (MQ=255)
                                                                                                                                                  cgGtaaaaccgctttagcacagggtggtgataccccccgtaggagcgggcttgcccgcgaagaggccagcactgccaacacaaaccttacaggctgaaatcgccttcagcagccagctcgctcagcggcttgcgcgggctcggcacttc    >  3:229173‑M1/1‑3 (MQ=255)
                                                                                                                                                    ggCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATtc  <  6:298837/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGGGGGTATCACCACCCTGTGCTAAAGCGGTTTTACCGCGAAGAGGCCGGTACAGGCCGCAGCGATCAGTAGCCCCGGGCGAAATCGACTTCACCCCGCAACCCCTGCCCCGCTTCATAAGCCCGCACATTC  >  NC_002947/5207546‑5207842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.