| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5447383 | 37 (0.630) | 4 (0.070) | 3/240 | NT | 9.8% | coding (888/1284 nt) | hemL | glutamate‑1‑semialdehyde 2,1‑aminomutase |
| ? | NC_002947 | = 5447413 | 39 (0.710) | coding (918/1284 nt) | hemL | glutamate‑1‑semialdehyde 2,1‑aminomutase | |||||
GGCGGCGCCCAGGGCCATTACGGCATCAAGCCGGACCTGTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5447237‑5447383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccggcGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCCTGGTAGACCGGGCCGAGCGGGGCGATGCAGCCCATGATTTCACGCTTGCCGCCGAAACAGCCGACCGGCATGCCGCCACCGACGATCTTG < NC_002947/5447413‑5447287 GGCGGCGCCCAGGGCCATTACGGCATCAAGCCGGACCTGTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCG < 1:339801/145‑1GGCGGCGCCCAGGGCCATTACGGCATCAAGCCGGACCTGTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCG > 2:339801/1‑145 CCTGTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCC < 4:287416/149‑1 CTGTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCCT < 7:80577/149‑1 ATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGC > 5:246388/1‑74 ATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGC < 6:246388/74‑1 CGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCC > 7:207140/1‑111 CGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCC < 8:207140/111‑1 GGCCGGCGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCCTGGTAGACCGGGCCGAGCGGGGCGATGCAGCCCATGATTTCACGCTTGCCGCCGAAACAGCCGACCGGCATGCCGCCACCGACGATCTTG < 1:36030/134‑1 GGCCGGCGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCCTGGTAGACCGGGCCGAGCGGGGCGATGCAGCCCATGATTTCACGCTTGCCGCCGAAACAGCCGACCGGCATGCCGCCACCGACGATCTTG > 2:36030/1‑134 GGCGGCGCCCAGGGCCATTACGGCATCAAGCCGGACCTGTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5447237‑5447383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccggcGGCCATGGCCAGCGGGTTGCCCGACAGGGTGCCGGCCTGGTAGACCGGGCCGAGCGGGGCGATGCAGCCCATGATTTCACGCTTGCCGCCGAAACAGCCGACCGGCATGCCGCCACCGACGATCTTG < NC_002947/5447413‑5447287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |