New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5447383	37 (0.630)	4 (0.070)	3/240	NT	9.8%	coding (888/1284 nt)	hemL	glutamate‑1‑semialdehyde 2,1‑aminomutase
	?	NC_002947	= 5447413	39 (0.710)					coding (918/1284 nt)	hemL	glutamate‑1‑semialdehyde 2,1‑aminomutase

GTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCG  >  NC_002947/5447275‑5447561                                                                                                                                           |                                                                                                                                                     gTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGa                                                                                                                                            >  1:218000/1‑149 (MQ=255) gTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGa                                                                                                                                            >  6:219466/1‑149 (MQ=255)      ccTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGaccacc                                                                                                                                       <  6:39638/149‑1 (MQ=255)             cAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCgccggcc                                                                                                                                               <  1:36030‑M2/134‑8 (MQ=255)             cAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCgccggcc                                                                                                                                               >  2:36030‑M2/1‑127 (MQ=255)             cAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGc                                                                                                                                >  5:38301/1‑149 (MQ=255)                  tcgtcgGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGCCCACCCTCAAGCTGAt                                                                                                                            >  6:276581/1‑148 (MQ=255)                             ggcATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAgg                                                                                                                >  6:79716/1‑149 (MQ=255)                                 tGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGGAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTc                                                                                                            <  3:70014/149‑1 (MQ=255)                                    cGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCAc                                                                                                         >  8:17933/1‑149 (MQ=255)                                       tCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGcc                                                                                                      >  6:178315/1‑149 (MQ=255)                                                 cggcggCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGAcc                                                                                             >  8:157351/1‑148 (MQ=255)                                                 cggcggCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCAGCTGGCCATGGCCGCCGGCCTGCCCACCCTCAAGCTGCTCAGCCGCCCAGGCTTCCACGCCGCGCTGccc                                                                                             >  8:39074/1‑148 (MQ=255)                                                  ggcggcAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGa                                                                                           >  7:82502/1‑149 (MQ=255)                                                     ggcAAGCGTGAAATCATGGGCTGCATCGCCACGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTa                                                                                        <  6:197320/149‑1 (MQ=255)                                                            gTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGc                                                                                 >  4:192931/1‑149 (MQ=255)                                                                 aTCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCAt                                                                            >  5:128839/1‑149 (MQ=255)                                                                  tCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATg                                                                           >  7:135757/1‑149 (MQ=255)                                                                    aTGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCt                                                                         >  2:111824/1‑149 (MQ=255)                                                                     tGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCtt                                                                        <  5:79716/149‑1 (MQ=255)                                                                         cTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACg                                                                    <  4:202743/149‑1 (MQ=255)                                                                            cATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGcc                                                                 >  1:203799/1‑149 (MQ=255)                                                                              tCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTg                                                               <  5:178315/149‑1 (MQ=255)                                                                                gCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTgca                                                             <  7:17933/149‑1 (MQ=255)                                                                                 ccccGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTgcag                                                            <  2:218000/149‑1 (MQ=255)                                                                                             cGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTgcag                                                            >  2:102336/1‑137 (MQ=255)                                                                                             cGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTgcag                                                            <  1:102336/137‑1 (MQ=255)                                                                                             cGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGAt                                                <  5:219466/149‑1 (MQ=255)                                                                                                      aGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCgccggcctggtagaccgggccgagcggggcgatgcagcccatgatttcacgcttgccgccgaaacagccgaccggcatgccgccaccgacgatcttgccgaaggtcgacag                                       <  7:80577‑M2/149‑112 (MQ=255)                                                                                                       ggCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCgccggcctggtagaccgggccgagcggggcgatgcagcccatgatttcacgcttgccgccgaaacagccgaccggcatgccgccaccgacgatcttgccgaaggtcgacagg                                      <  4:287416‑M2/149‑113 (MQ=255)                                                                                                       ggCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCgccggcctggtagaccgggccgagcggggcgatgcagcccatgatttcacgcttgccgccgaaacagccgaccg                                                                            >  7:207140‑M2/1‑37 (MQ=255)                                                                                                       ggCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCgccggcctggtagaccgggccgagcggggcgatgcagcccatgatttcacgcttgccgccgaaacagccgaccg                                                                            <  8:207140‑M2/111‑75 (MQ=255)                                                                                                       ggCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCg                                      >  1:125427/1‑149 (MQ=255)                                                                                                          cGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGc                                   >  8:348157/1‑149 (MQ=255)                                                                                                           ggCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGc                                   >  1:133495/1‑148 (MQ=255)                                                                                                           ggCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGc                                   >  5:6891/1‑148 (MQ=255)                                                                                                               cccTGTCGGGCAACCCGCTGGCCTTGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTc                              <  7:39074/149‑1 (MQ=255)                                                                                                                ccTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCg                             >  1:42376/1‑149 (MQ=255)                                                                                                                    tCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTc                           <  3:192931/147‑1 (MQ=255)                                                                                                                      gggCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTcacca                       <  2:203799/149‑1 (MQ=255)                                                                                                                       ggCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTcaccac                      <  6:128839/149‑1 (MQ=255)                                                                                                                        gCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTc                              >  6:2808/1‑140 (MQ=255)                                                                                                                        gCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTc                              <  5:2808/140‑1 (MQ=255)                                                                                                                         cAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCAccc                    <  7:157351/149‑1 (MQ=255)                                                                                                                             ccGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGc                >  5:65551/1‑149 (MQ=255)                                                                                                                                     cATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCa        >  1:94352/1‑149 (MQ=255)                                                                                                                                     cATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCa        >  4:96921/1‑149 (MQ=255)                                                                                                                                           cgccgGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTc                           <  4:287770/124‑1 (MQ=255)                                                                                                                                           cgccgGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTc                           >  3:287770/1‑124 (MQ=255)                                                                                                                                           cgccgGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTc   <  7:36678/148‑1 (MQ=255)                                                                                                                                           cgccgGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTc   >  8:36678/1‑148 (MQ=255)                                                                                                                                           cgccgGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCg  >  1:63763/1‑149 (MQ=255)                                                                                                                                           cgccgGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCg  <  8:135757/149‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                     GTCGACCTTCGGCAAGATCGTCGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGTGAAATCATGGGCTGCATCGCCCCGCTCGGCCCGGTCTACCAGGCCGGCACCCTGTCGGGCAACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTCAAGCTGATCAGCCGCCCAGGCTTCCACGCCGAGCTGACCGACTACACCAGCCGCATGCTTGACGGCCTGCAGCAACGCGCCGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCG  >  NC_002947/5447275‑5447561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.