New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5758533	38 (0.650)	5 (0.090)	4/252	NT	11.3%	coding (399/438 nt)	PP_5051	hypothetical protein
	?	NC_002947	= 5758566	41 (0.710)					coding (366/438 nt)	PP_5051	hypothetical protein

GCAGCACCGCCGCTTTTGGGGACCTCGGTACAGGCAGGCCGGGTATCCCCCCTTTATACGCAGTACCCCTTTTGGGGACCCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5758383‑5758533 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGACGCTGG  <  NC_002947/5758566‑5758528                                                                                                                                                                                                GCAGCACCGCCGCTTTTGGGGACCTCGGTACAGGCAGGCCGGGTATCCCCCCTTTATACGCAGTACCCCTTTTGGGGACCCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAG                                           >  7:343631/1‑149                                    AGGCCGGGTATCCCCCCTTTATACGCAGTACCCCTTTTGGGGACCCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCGCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGA        <  3:282124/149‑1                                                 CCCCTTTATACGCAGTACCCCTTTTGGGGACCCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCGCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGACGCTGG  <  7:221691/142‑1                                                 CCCCTTTATACGCAGTACCCCTTTTGGGGACCCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCGCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGACGCTGG  >  8:221691/1‑142                                                                                CCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCGCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGACGCTGG  >  1:145317/1‑111                                                                                CCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCGCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGACGCTGG  <  2:145317/111‑1                                                                                                                                                                                                GCAGCACCGCCGCTTTTGGGGACCTCGGTACAGGCAGGCCGGGTATCCCCCCTTTATACGCAGTACCCCTTTTGGGGACCCTGGTACAGGCAGGCCGGGATATCCCCTCTTTTATTCGTGCAGTTTCACTTGCACCCGCCAGCGCCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5758383‑5758533 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgCCCCCTGCACGGCGAATGGGCCGGTGCAGAGGACGCTGG  <  NC_002947/5758566‑5758528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.