| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5783559 | 44 (0.750) | 4 (0.070) | 4/244 | NT | 8.0% | coding (2034/3309 nt) | kefA | intermediate mechanosensitive channel protein |
| ? | NC_002947 | = 5783588 | 51 (0.920) | coding (2063/3309 nt) | kefA | intermediate mechanosensitive channel protein | |||||
GCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5783410‑5783559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcgATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGT < NC_002947/5783588‑5783444 GCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGC < 3:129159/149‑1GCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGC > 4:129159/1‑149 GGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCC < 7:280602/140‑1 GGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCC > 8:280602/1‑140 CTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCT > 3:368941/1‑83 CTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCT < 4:368941/83‑1 CAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGT < 7:140808/149‑1 GGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGT > 8:228514/1‑149 GCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5783410‑5783559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcgATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGT < NC_002947/5783588‑5783444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |