New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1357723	45 (0.760)	4 (0.070)	4/248	NT	7.8%	coding (904/1608 nt)	PP_1182	sensor histidine kinase
	?	NC_002947	= 1357754	51 (0.900)					coding (935/1608 nt)	PP_1182	sensor histidine kinase

GCTGGTGCGTCAGCTGGAACGTCGTGTGTCGGGCCTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGG  >  NC_002947/1357575‑1357870                                                                                                                                                        |                                                                                                                                                    gctgGTGCGTCAGCTGGAACGTCGTGTGTCGGGCCTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑C                                                                                                                                                     >  1:175458‑M1/1‑149 (MQ=255)   tgGTGCGTCAGCTGGAACGTCGTGTGTCGGGCCTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTg                                                                                                                                                   >  3:138029/1‑149 (MQ=255)      tGCGTCAGCTGGAACGTCGTGTGTCGGGCCTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAg                                                                                                                                                >  4:48278/1‑149 (MQ=255)          tCAGCTGGAACGTCGTGTGTCGGGCCTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGcgct                                                                                                                                            >  8:214941/1‑149 (MQ=255)                                   cTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggt                                                                                                                   >  7:312144‑M2/1‑146 (MQ=255)                                   cTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTCGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggt                                                                                                                   <  2:302253‑M2/149‑4 (MQ=255)                                     ggAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑Cagctcgcgctgcatggtcagcgagcgctgcaggtgc                                                                                                                 <  7:221599‑M1/149‑37 (MQ=255)                                      gagaTTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACAGCCGCTTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtg                                                                                                                  >  3:27561‑M2/1‑143 (MQ=255)                                      gagaTTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCagctcgcgctgcatggtcagcgagcgctgcag                                                                                                                     <  3:48278‑M1/147‑33 (MQ=255)                                         aTTGCTGCCACGCGCATCACCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGc                                                                                                             >  5:308296/1‑149 (MQ=255)                                            gcggcCACGCGCATCGCCCAGGGCAGCCGGGCCACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCACTGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                            <  3:338374/144‑1 (MQ=255)                                             ctgcCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtg                                                                                                         >  8:212614/1‑149 (MQ=255)                                              tgcCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTg                                                                                                                                                   <  1:351319/106‑1 (MQ=255)                                              tgcCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTg                                                                                                                                                   >  2:351319/1‑106 (MQ=255)                                              tgcCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtgt                                                                                                        >  4:248613/1‑149 (MQ=255)                                                ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGa                                                                                                                         >  4:204748/1‑130 (MQ=255)                                                ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtgt                                                                                                        <  4:138029/147‑1 (MQ=255)                                                ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtgt                                                                                                        <  5:48622/147‑1 (MQ=255)                                                ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTc                                                                                                       <  2:123688/148‑1 (MQ=255)                                                 cACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑Cagctcgcgctgcatggtcagcgagcgctgcaggtgctcg                                                                                                              <  2:170420‑M1/140‑40 (MQ=255)                                                 cACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑Cagctcgcgctgcatggtcagcgagcgctgcaggtgctcg                                                                                                              >  1:170420‑M1/1‑101 (MQ=255)                                                  aCGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCa                                                                                                    >  5:210514/1‑149 (MQ=255)                                                   cgcgCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCAc                                                                                                   <  7:11118/149‑1 (MQ=255)                                                     cgcATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGa                                                                                                 <  8:217916/149‑1 (MQ=255)                                                        aTCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCt                                                                                              >  4:63968/1‑149 (MQ=255)                                                            cccAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGACGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CAGCAGCGCTCGCTGACCATCCAGCGCGAGCTGGTGCCAGCGCTGTCCCACGAGCTTCGc                                                                                          >  5:228347/1‑149 (MQ=255)                                                                gggCAGCCTCGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGc                                                                                      <  1:302253/149‑1 (MQ=255)                                                                   cAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                            <  3:242528/124‑1 (MQ=255)                                                                   cAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                            >  4:242528/1‑124 (MQ=255)                                                                      ccTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGATGACCATGCAGAGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTACGCAAGCCGGTgt                                                                                >  8:347596/1‑148 (MQ=255)                                                                       cTGGACACCCGCGTGCCGTCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGgc                                                                               >  7:12723/1‑149 (MQ=255)                                                                             acCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCt                                                                         >  4:298008/1‑149 (MQ=255)                                                                               ccGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                            >  5:91948/1‑112 (MQ=255)                                                                               ccGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                            <  6:91948/112‑1 (MQ=255)                                                                               ccGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTgc                                                                       >  1:186088/1‑149 (MQ=255)                                                                                       cggccggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGc                                                               >  3:173445/1‑149 (MQ=255)                                                                                        ggccggcGACGCCGACTCGCTAGGGCGCCTGGCTGCTGCCTTCAAAGGCATGCCCGAGCAC‑‑‑CTGCACCGCTCGCTGAACATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGCCGCGCCTGCGCTATGGCt                                                              >  4:32879/1‑149 (MQ=255)                                                                                          ccggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTg                                                            <  2:175458/149‑1 (MQ=255)                                                                                          ccggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTg                                                            <  7:214941/149‑1 (MQ=255)                                                                                           cggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCCCGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTg                                                            >  3:37867/1‑148 (MQ=255)                                                                                               gACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAgat                                                       <  3:326636/149‑1 (MQ=255)                                                                                                 cGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAgatga                                                     <  6:308296/149‑1 (MQ=255)                                                                                                   ccGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATc                                                   <  2:186088/149‑1 (MQ=255)                                                                                                     gACTGGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGa                                                 <  7:347596/149‑1 (MQ=255)                                                                                                        tCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCGTTGGCTTGGAGATGATCGAAAg                                              >  5:104515/1‑149 (MQ=255)                                                                                                           gTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAgcgc                                           >  4:17659/1‑149 (MQ=255)                                                                                                              gggCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCAc                                        <  3:63968/149‑1 (MQ=255)                                                                                                                     tGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGaa                                 <  7:212614/149‑1 (MQ=255)                                                                                                                      ggCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAAc                                <  3:17659/149‑1 (MQ=255)                                                                                                                        ctgctgCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAg                              >  6:154428/1‑149 (MQ=255)                                                                                                                         tgctgcCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAgg                             >  2:227604/1‑149 (MQ=255)                                                                                                                              ccTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCgg                        >  6:77958/1‑149 (MQ=255)                                                                                                                                ttCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTgcgc                                                                     <  8:275784/102‑1 (MQ=255)                                                                                                                                ttCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTgg                                                           >  6:269365/1‑112 (MQ=255)                                                                                                                                ttCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTgg                                                           <  5:269365/112‑1 (MQ=255)                                                                                                                                     tggcatggcCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGc                 <  4:173445/149‑1 (MQ=255)                                                                                                                                       gcatggcCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCAt               <  1:227604/149‑1 (MQ=255)                                                                                                                                              cGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtg                 >  1:170420‑M2/1‑39 (MQ=255)                                                                                                                                              cGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtg                 <  2:170420‑M2/140‑102 (MQ=255)                                                                                                                                                 gCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtggcagcaatctcc     <  7:221599‑M2/149‑114 (MQ=255)                                                                                                                                                 gCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCa     <  5:77958/149‑1 (MQ=255)                                                                                                                                                  cAC‑‑‑Cagctcgcgctgcatggtcagcgagcgctgcaggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcaagcggctgtccaggctgccctgggcgatgcgcgtggcagcaatctc      >  3:27561‑M1/1‑4 (MQ=255)                                                                                                                                                  cAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCAt    <  3:248613/149‑1 (MQ=255)                                                                                                                                                   aC‑‑‑Cagctcgcgctgcatggtcagcgagcgctgcaggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtcgaggctgccctgggcgatgcgcgtggcagcaatctccag   <  2:302253‑M1/149‑147 (MQ=255)                                                                                                                                                   aC‑‑‑Cagctcgcgctgcatggtcagcgagcgctgcaggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtggcagcaatctccag   >  7:312144‑M1/1‑3 (MQ=255)                                                                                                                                                    c‑‑‑cTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTaa                   >  4:122329/1‑132 (MQ=255)                                                                                                                                                    c‑‑‑cTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTaa                   <  3:122329/132‑1 (MQ=255)                                                                                                                                                    c‑‑‑cTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATgg  <  4:37867/149‑1 (MQ=255)                                                                                                                                                        cTGCAGCGCTCGCTGACCATGCAGCGCGAGCTgcaggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtggcagcaatctc   <  3:48278‑M2/147‑116 (MQ=255)                                                                                                                                                        |                                                                                                                                                    GCTGGTGCGTCAGCTGGAACGTCGTGTGTCGGGCCTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCAC‑‑‑CTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGG  >  NC_002947/1357575‑1357870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.