New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1357723	45 (0.760)	4 (0.070)	4/248	NT	7.8%	coding (904/1608 nt)	PP_1182	sensor histidine kinase
	?	NC_002947	= 1357754	51 (0.900)					coding (935/1608 nt)	PP_1182	sensor histidine kinase

CTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGACCTCGACAAGCTGGT  >  NC_002947/1357609‑1357901                                                                                                                                                  |                                                                                                                                                    cTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggt                                                                                                                                                  >  7:312144‑M2/1‑146 (MQ=255) cTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTCGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggt                                                                                                                                                  <  2:302253‑M2/149‑4 (MQ=255)    gagaTTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACAGCCGCTTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtg                                                                                                                                                 >  3:27561‑M2/1‑143 (MQ=255)       aTTGCTGCCACGCGCATCACCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGc                                                                                                                                            >  5:308296/1‑149 (MQ=255)          gcggcCACGCGCATCGCCCAGGGCAGCCGGGCCACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCACTGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                                                           <  3:338374/144‑1 (MQ=255)           ctgcCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtg                                                                                                                                        >  8:212614/1‑149 (MQ=255)            tgcCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtgt                                                                                                                                       >  4:248613/1‑149 (MQ=255)              ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtgt                                                                                                                                       <  4:138029/147‑1 (MQ=255)              ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGgtgt                                                                                                                                       <  5:48622/147‑1 (MQ=255)              ccACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTc                                                                                                                                      <  2:123688/148‑1 (MQ=255)                aCGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCa                                                                                                                                   >  5:210514/1‑149 (MQ=255)                 cgcgCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCAc                                                                                                                                  <  7:11118/149‑1 (MQ=255)                   cgcATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGa                                                                                                                                <  8:217916/149‑1 (MQ=255)                      aTCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCt                                                                                                                             >  4:63968/1‑149 (MQ=255)                          cccAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGACGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCAGCAGCGCTCGCTGACCATCCAGCGCGAGCTGGTGCCAGCGCTGTCCCACGAGCTTCGc                                                                                                                         >  5:228347/1‑149 (MQ=255)                              gggCAGCCTCGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGc                                                                                                                     <  1:302253/149‑1 (MQ=255)                                 cAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                                                           >  4:242528/1‑124 (MQ=255)                                 cAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                                                           <  3:242528/124‑1 (MQ=255)                                    ccTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGATGACCATGCAGAGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTACGCAAGCCGGTgt                                                                                                               >  8:347596/1‑148 (MQ=255)                                     cTGGACACCCGCGTGCCGTCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGgc                                                                                                              >  7:12723/1‑149 (MQ=255)                                           acCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCt                                                                                                        >  4:298008/1‑149 (MQ=255)                                             ccGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                                                           >  5:91948/1‑112 (MQ=255)                                             ccGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCg                                                                                                                                           <  6:91948/112‑1 (MQ=255)                                             ccGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTgc                                                                                                      >  1:186088/1‑149 (MQ=255)                                                     cggccggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGc                                                                                              >  3:173445/1‑149 (MQ=255)                                                      ggccggcGACGCCGACTCGCTAGGGCGCCTGGCTGCTGCCTTCAAAGGCATGCCCGAGCACCTGCACCGCTCGCTGAACATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGCCGCGCCTGCGCTATGGCt                                                                                             >  4:32879/1‑149 (MQ=255)                                                        ccggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTg                                                                                           <  7:214941/149‑1 (MQ=255)                                                        ccggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTg                                                                                           <  2:175458/149‑1 (MQ=255)                                                         cggcGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCCCGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTg                                                                                           >  3:37867/1‑148 (MQ=255)                                                             gACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAgat                                                                                      <  3:326636/149‑1 (MQ=255)                                                               cGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAgatga                                                                                    <  6:308296/149‑1 (MQ=255)                                                                 ccGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATc                                                                                  <  2:186088/149‑1 (MQ=255)                                                                   gACTGGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGa                                                                                <  7:347596/149‑1 (MQ=255)                                                                      tCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCGTTGGCTTGGAGATGATCGAAAg                                                                             >  5:104515/1‑149 (MQ=255)                                                                         gTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAgcgc                                                                          >  4:17659/1‑149 (MQ=255)                                                                            gggCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCAc                                                                       <  3:63968/149‑1 (MQ=255)                                                                                   tGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGaa                                                                <  7:212614/149‑1 (MQ=255)                                                                                    ggCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAAc                                                               <  3:17659/149‑1 (MQ=255)                                                                                      ctgctgCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAg                                                             >  6:154428/1‑149 (MQ=255)                                                                                       tgctgcCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAgg                                                            >  2:227604/1‑149 (MQ=255)                                                                                            ccTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCgg                                                       >  6:77958/1‑149 (MQ=255)                                                                                              ttCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTgcgc                                                                                                    <  8:275784/102‑1 (MQ=255)                                                                                              ttCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTgg                                                                                          >  6:269365/1‑112 (MQ=255)                                                                                              ttCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTgg                                                                                          <  5:269365/112‑1 (MQ=255)                                                                                                   tggcatggcCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGc                                                <  4:173445/149‑1 (MQ=255)                                                                                                     gcatggcCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCAt                                              <  1:227604/149‑1 (MQ=255)                                                                                                            cGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtg                                                >  1:170420‑M2/1‑39 (MQ=255)                                                                                                            cGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtg                                                <  2:170420‑M2/140‑102 (MQ=255)                                                                                                               gCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtggcagcaatctcc                                    <  7:221599‑M2/149‑114 (MQ=255)                                                                                                               gCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCa                                    <  5:77958/149‑1 (MQ=255)                                                                                                                cACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCAt                                   <  3:248613/149‑1 (MQ=255)                                                                                                                  ccTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTaa                                                  <  3:122329/132‑1 (MQ=255)                                                                                                                  ccTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTaa                                                  >  4:122329/1‑132 (MQ=255)                                                                                                                  ccTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATgg                                 <  4:37867/149‑1 (MQ=255)                                                                                                                   cTGCAGCGCTCGCTGACCATGCAGCGCGAGCTgcaggtgctcggccatgccattgaaggcagcagccaggcgccctaccgagtcggcgtcgccggccggcacgcgggtgtccaggctgccctgggcgatgcgcgtggcagcaatctc                                  <  3:48278‑M2/147‑116 (MQ=255)                                                                                                                      ccgcgcTCGCTGACCATGCAGCGGGAGCTTGTGCGAGCGGTGTCCCAGGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATTGACgg                             <  6:228347/147‑1 (MQ=255)                                                                                                                           ctcgctGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGata                        >  6:55398/1‑149 (MQ=255)                                                                                                                              gctGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATAtt                      >  1:144745/1‑148 (MQ=255)                                                                                                                               ctGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCa                    <  4:343937/149‑1 (MQ=255)                                                                                                                                tGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAg                   <  3:295187/149‑1 (MQ=255)                                                                                                                                    cATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGAcc               >  7:208785/1‑149 (MQ=255)                                                                                                                                    cATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGAcc               <  8:208785/149‑1 (MQ=255)                                                                                                                                        cAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGACCTCgg           >  5:199634/1‑148 (MQ=255)                                                                                                                                          gcgcGAGATGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGACCTCGAc          >  7:94995/1‑148 (MQ=255)                                                                                                                                                 gtGGTGCTAGCTGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGTCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGACCTCGACAAGCTgg   <  3:32879/147‑1 (MQ=255)                                                                                                                                                 cTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGACCTCGACAAGCTGGt  <  3:298008/149‑1 (MQ=255)                                                                                                                                                  tGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGaa                                                                <  2:278968/86‑1 (MQ=255)                                                                                                                                                  tGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGc                                                         >  6:85824/1‑93 (MQ=255)                                                                                                                                                  tGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGc                                                         <  5:85824/93‑1 (MQ=255)                                                                                                                                                  tGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTATGGCTTGGAGATGATCGAAAGCGCCACGACTGaa                                                                >  1:278968/1‑86 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CTGGAGATTGCTGCCACGCGCATCGCCCAGGGCAGCCTGGACACCCGCGTGCCGGCCGGCGACGCCGACTCGGTAGGGCGCCTGGCTGCTGCCTTCAATGGCATGGCCGAGCACCTGCAGCGCTCGCTGACCATGCAGCGCGAGCTGGTGCGAGCGGTGTCCCACGAGCTTCGCACGCCGGTGGCGCGCCTGCGCTTTGGCTTGGAGATGATCGAAAGCGCCACGACTGAACAGGTGCGGGCTAAGCATCTGGCGGGCATGGACGGGGATATTCAGGACCTCGACAAGCTGGT  >  NC_002947/1357609‑1357901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.