New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2778210	52 (0.880)	3 (0.050)	3/248	NT	5.6%	coding (176/831 nt)	PP_2430	AraC family transcriptional regulator
	?	NC_002947	= 2778237	52 (0.920)					coding (149/831 nt)	PP_2430	AraC family transcriptional regulator

TGTCGCCCGGCGCGTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCGGCGTC  >  NC_002947/2778067‑2778358                                                                                                                                                |                                                                                                                                                      tGTCGCCCGGCGCGTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGc                                                                                                                                                  >  8:153325/1‑149 (MQ=255)  gTCGCCCGGCGCGTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCg                                                                                                                                                 >  6:335593/1‑149 (MQ=255)   tCGCCCGGCGCGTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGc                                                                                                                                                  <  4:106934/147‑1 (MQ=255)       ccGGCGCGTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGtgctg                                                                                                                                            >  6:155577/1‑149 (MQ=255)           cgcgTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGAt                                                                                                                                        >  1:334043/1‑149 (MQ=255)             cgTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATgg                                                                                                                                      <  2:172616/149‑1 (MQ=255)              gTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGc                                                                                                                                     >  6:299957/1‑149 (MQ=255)                             gcgcAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCgccgggtacgccatcgcagcacgccggggcagg                                                                                                                      >  2:208104‑M1/1‑116 (MQ=255)                               gcAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCgccgggtacgccatcgcagcacgccggggcaggta                                                                                                                    <  4:81799‑M1/149‑36 (MQ=255)                                 aGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGaa                                                                                                                  >  7:260451/1‑149 (MQ=255)                                  gCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCgccgggtaccccatcgcagcacgccggggcaggtattc                                                                                                                 <  1:208104‑M1/149‑39 (MQ=255)                                  gCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑c                                                                                                                <  4:53351/149‑1 (MQ=255)                                      ttGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGtt                                                                                                                     <  6:69247/141‑1 (MQ=255)                                      ttGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGtt                                                                                                                     >  5:69247/1‑141 (MQ=255)                                      ttGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑ctgct                                                                                                            <  5:335593/149‑1 (MQ=255)                                         gTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCa                                                                                                         >  3:68300/1‑149 (MQ=255)                                                    cGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCg                                                                                              <  5:155577/149‑1 (MQ=255)                                                       gCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGt                                                                                            <  6:355192/148‑1 (MQ=255)                                                       gCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGAACGCCCTGCTCGGt                                                                                            >  5:355192/1‑148 (MQ=255)                                                           cAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCAc                                                                                         <  6:326391/147‑1 (MQ=255)                                                           cAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGc                                                                                       >  3:289733/1‑149 (MQ=255)                                                             ggTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGcc                                                                                      >  5:331429/1‑148 (MQ=255)                                                                 cAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGAcc                                                                                  <  2:334043/148‑1 (MQ=255)                                                                    cGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGa                                                                              <  6:368728/149‑1 (MQ=255)                                                                        gAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCt                                                                          >  2:268023/1‑149 (MQ=255)                                                                         aaTAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGGCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCggcag                                                                                                                       <  1:80953‑M2/104‑6 (MQ=255)                                                                         aaTAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCggcag                                                                                                                       >  2:80953‑M2/1‑99 (MQ=255)                                                                             ggTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCg                                                                      <  4:68300/148‑1 (MQ=255)                                                                             ggTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGt                                                                     <  5:299957/149‑1 (MQ=255)                                                                              gTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTAAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTg                                                                    >  1:274100/1‑149 (MQ=255)                                                                               tGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGCCCAGGAAGCTGTCGTGc                                                                   >  6:88220/1‑149 (MQ=255)                                                                               tGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGt                                                                     <  5:41975/147‑1 (MQ=255)                                                                               tGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGt                                                                     >  6:41975/1‑147 (MQ=255)                                                                               tGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGc                                                                   >  6:45886/1‑149 (MQ=255)                                                                                gAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGc                                                                                                                                     >  1:173947/1‑83 (MQ=255)                                                                                gAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGc                                                                                                                                     <  2:173947/83‑1 (MQ=255)                                                                                 aaGCCTTCTTCGGTGGGCGCCAGTCCATCGTGGTTGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGATTGCTGCGATGGCGTACCGGGCGGCAGTTGAA‑CTGCTGGAGGCCGTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCa                                                                 <  5:88220/149‑1 (MQ=255)                                                                                 aaGCCTTCTTCGGGGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAATCTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGc                                                                   <  1:268023/148‑1 (MQ=255)                                                                                   gCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGt                                                               <  6:331429/149‑1 (MQ=255)                                                                                         ttcGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGt                                                         >  2:140750/1‑149 (MQ=255)                                                                                           cGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTggggg                                                          <  7:153325/146‑1 (MQ=255)                                                                                           cGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTggggg                                                          <  5:45886/146‑1 (MQ=255)                                                                                              tGGGCGCCAGG‑CATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAg                                                                            <  1:209451/124‑1 (MQ=255)                                                                                              tGGGCGCCAGG‑CATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAg                                                                            >  2:209451/1‑124 (MQ=255)                                                                                                   gcCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATa                                                     >  4:122199/1‑143 (MQ=255)                                                                                                   gcCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATa                                                     <  3:122199/143‑1 (MQ=255)                                                                                                     cAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGa                                                                                    >  5:200123/1‑110 (MQ=255)                                                                                                     cAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGa                                                                                    <  6:200123/110‑1 (MQ=255)                                                                                                        gCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGa                                          <  1:140750/149‑1 (MQ=255)                                                                                                             cGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTc                                                                                           >  6:341693/1‑95 (MQ=255)                                                                                                             cGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTc                                                                                           <  5:341693/95‑1 (MQ=255)                                                                                                              gTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAAt                                    <  8:260451/149‑1 (MQ=255)                                                                                                                 gATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATgcg                                 >  3:282110/1‑149 (MQ=255)                                                                                                                              tCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGcc                                                                                      >  7:301036/1‑83 (MQ=255)                                                                                                                              tCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGcc                                                                                      <  8:301036/83‑1 (MQ=255)                                                                                                                              tCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTc                    >  7:258589/1‑149 (MQ=255)                                                                                                                                aaGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTc                    <  8:258589/147‑1 (MQ=255)                                                                                                                                  gTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATg                >  8:177411/1‑149 (MQ=255)                                                                                                                                      gAATACCTGCCCCGGCGTGCTGCGATGGGGTACCCGGCggcaggtattcttacttgagcctggcgacatccacgatggcctggcgcccaccgaagaaggcttcacctattcgacgctgtacctggagcccgcctggctcgaccaacagc             <  1:208104‑M2/149‑112 (MQ=255)                                                                                                                                         tACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCggcaggtattcttacttgagcctggcgacatccacgatggcctggcgcccaccgaagaaggcttcacctattcgacgctgtacctggagcccgcctggctcgaccaacagctgc          <  4:81799‑M2/149‑115 (MQ=255)                                                                                                                                           ccTGCCCCGGCGTGCTGCGATGGCGTACCCGGCggcaggtattcttacttgagcctggcgacatccacgatggcctggcgcccaccgaagaaggcttcacctattcgacgctgtacctggagcccgcctggctcgaccaacagctgcgc        >  2:208104‑M2/1‑33 (MQ=255)                                                                                                                                           ccTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCg       >  1:231028/1‑149 (MQ=255)                                                                                                                                            cTGCCgccgggtacgccatcgcagcacgccggggcaggtattcttacttgagcctggcgacatccacgatggcctggcgcccaccgaagaaggcttcacctatt                                                    >  2:80953‑M1/1‑5 (MQ=255)                                                                                                                                            cTGCCgccgggtacgccatcgcagcacgccggggcaggtattcttacttgagcctgccgacatccacgatggcctggcgcccaccgaagaaggcttcacctatt                                                    <  1:80953‑M1/104‑100 (MQ=255)                                                                                                                                            cTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCgg      >  6:55437/1‑149 (MQ=255)                                                                                                                                            cTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCgg      >  7:65944/1‑149 (MQ=255)                                                                                                                                                cccGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGCCTCGATg                >  1:322972/1‑135 (MQ=255)                                                                                                                                                cccGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATg                <  2:322972/135‑1 (MQ=255)                                                                                                                                                cccGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCGGCGTc  <  4:289733/149‑1 (MQ=255)                                                                                                                                                cccGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCGGCGTc  >  3:55059/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                      TGTCGCCCGGCGCGTGCTCGTACAGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGTGAAGCCTTCTTCGGTGGGCGCCAGGCCATCGTGGATGTCGCCAGGCTCAAGTAAGAATACCTGCCCCGGCGTGCTGCGATGGCGTACCCGGCGGCAGTTGAA‑CTGCTGCACGCCCTGCTCGGTCACGCCGACCAGGAAGCTGTCGTGCCAGTGGGGGTCATAGGCATGGCCGACAAAATGCGCACGGACCGACTCGATGCCGGTGTCGGCGTC  >  NC_002947/2778067‑2778358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.