New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2786752	49 (0.830)	5 (0.090)	5/240	NT	9.0%	intergenic (‑84/‑238)	alx/ahpC	alkaline‑induced transporter/peroxiredoxin/alkylhydroperoxide reductase small subunit
	?	NC_002947	= 2786780	55 (1.000)					intergenic (‑112/‑210)	alx/ahpC	alkaline‑induced transporter/peroxiredoxin/alkylhydroperoxide reductase small subunit

CAGCCACAACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAA  >  NC_002947/2786606‑2786900                                                                                                                                                   |                                                                                                                                                     cAGCCACAACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACAt                                                                                                                                                    >  7:208961/1‑149 (MQ=255)  aGCCACAACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATg                                                                                                                                                   <  4:235898/149‑1 (MQ=255)   gCCACAACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATgg                                                                                                                                                  <  1:226436/149‑1 (MQ=255)     cacaACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCATAGGGGCCCGGTATCACATGGGc                                                                                                                                                <  7:57351/149‑1 (MQ=255)     cacaACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGc                                                                                                                                                <  2:71627/149‑1 (MQ=255)      acaACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACAt                                                                                                                                                    <  4:132412/144‑1 (MQ=255)      acaACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACAt                                                                                                                                                    >  3:132412/1‑144 (MQ=255)             ggCGCTGGTACCGATGACAGGTCATGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCACCATGAATGTCGACCTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCACCCGTCATAGGCGCCCGGAATCACgggcaaacgggtc                                                                                                                                         >  6:74341‑M1/1‑135 (MQ=255)             ggCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCg                                                                                                                                         >  3:341289/1‑148 (MQ=255)                               aGGTGTTGTGAGGAATGATTGCTTAGGTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAAGAGTGATCCGACATTGCGGGTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtga                                                                                                                      >  8:217382‑M2/1‑145 (MQ=255)                                 gtgtTGTGAGGAATGATTGTAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgata                                                                                                                    <  8:323382‑M2/149‑7 (MQ=255)                                  tgttgtGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACgggcaaacgggtctacgctcaagcccatgtgatac                                                                                                                   <  3:2562‑M1/149‑36 (MQ=255)                                    ttgtGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACgggcaaacgggtctacgctcaagcccatgtgataccg                                                                                                                 <  5:74341‑M1/149‑38 (MQ=255)                                      gtgAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACgggcaaacgggtctacgctcaagcccatgtgataccgg                                                                                                                <  1:22435‑M1/148‑39 (MQ=255)                                        gAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAAt                                                                                                              <  8:208961/148‑1 (MQ=255)                                           gAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATg                                                                                                                                                   <  7:39116/108‑1 (MQ=255)                                           gAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATg                                                                                                                                                   >  8:39116/1‑108 (MQ=255)                                           gAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGa                                                                                                                                            <  7:62254/115‑1 (MQ=255)                                           gAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGa                                                                                                                                            >  8:62254/1‑115 (MQ=255)                                               gATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACgggcaaacgggtctacgctcaagcccatgt                                                                                                                        >  8:113109‑M1/1‑101 (MQ=255)                                                 ttGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGa                                                                                                         >  4:204732/1‑144 (MQ=255)                                                 ttGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGa                                                                                                         <  3:204732/144‑1 (MQ=255)                                                           gTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCtt                                                                                          >  7:80316/1‑149 (MQ=255)                                                            tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCttt                                                                                         <  7:323382/149‑1 (MQ=255)                                                            tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCttt                                                                                         >  1:272354/1‑149 (MQ=255)                                                            tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCt                                                                                           <  4:341289/147‑1 (MQ=255)                                                            tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACAAGGGCTTGAGCGTAGACACGTTTGCCCGTGATACCGAATGGGGAGCTCTTACAtttatat                                                                                         >  7:170778/1‑145 (MQ=255)                                                             cATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTg                                                                                        >  7:144035/1‑149 (MQ=255)                                                              aTGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGc                                                                                       <  5:164582/149‑1 (MQ=255)                                                              aTGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCCACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGATTGCCCGTGATACCGAATGGCGAGCTGTTACATTTCTTTGc                                                                                       >  5:93873/1‑149 (MQ=255)                                                                     cctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                  >  5:118921/1‑147 (MQ=255)                                                                     cctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                  >  2:228174/1‑147 (MQ=255)                                                                      ctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                  >  4:227334/1‑146 (MQ=255)                                                                      ctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                  >  2:124883/1‑146 (MQ=255)                                                                         ctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGTGTAGACCCGTTTGCCCGTGATACCGAATg                                                                                                             >  5:380980/1‑116 (MQ=255)                                                                         ctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGTGTAGACCCGTTTGCCCGTGATACCGAATg                                                                                                             <  6:380980/116‑1 (MQ=255)                                                                           tGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGCCCCGTTTGCCCGGGATACGGAATGGGGAGATGTTACATTTCTTTGACAGTGCAGAGtt                                                                           >  7:206385/1‑148 (MQ=255)                                                                             aaTGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCa                                                                         <  1:124883/148‑1 (MQ=255)                                                                                          cAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCtt                                                           <  8:80316/149‑1 (MQ=255)                                                                                           aaGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCttt                                                          >  7:270069/1‑149 (MQ=255)                                                                                           aaGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCttt                                                          >  6:184601/1‑149 (MQ=255)                                                                                              gCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCt                                                       <  2:272354/149‑1 (MQ=255)                                                                                                aaCAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCt                                                       >  4:360750/1‑147 (MQ=255)                                                                                                        tCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTc                                             >  6:103088/1‑149 (MQ=255)                                                                                                            aCATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCtt                                         >  2:241670/1‑149 (MQ=255)                                                                                                             cATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTc                                        <  6:93873/149‑1 (MQ=255)                                                                                                               tGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTa                                      <  5:103088/149‑1 (MQ=255)                                                                                                                 gcggcTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTAt                                     <  5:184601/148‑1 (MQ=255)                                                                                                                   ggcTTGGCAGCAGTCAGAGGGGCCCGGTATCACATGGGCTTTATCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGATGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGAAATACTTTGATAAGCCCGTTCCCTTCTATTa                                   >  5:71544/1‑148 (MQ=255)                                                                                                                    gcTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTaaa                                 <  6:118921/149‑1 (MQ=255)                                                                                                                         gCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAcc                            >  2:134820/1‑149 (MQ=255)                                                                                                                         gCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAc                             <  8:144035/148‑1 (MQ=255)                                                                                                                           aGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAccc                           >  8:5310/1‑148 (MQ=255)                                                                                                                            gCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCa                         <  1:241670/149‑1 (MQ=255)                                                                                                                             ccGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAg                        >  2:309199/1‑149 (MQ=255)                                                                                                                                   gagGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTtata                   <  2:110278/148‑1 (MQ=255)                                                                                                                                   gagGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTta                     >  1:110278/1‑146 (MQ=255)                                                                                                                                    agGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGc                 >  8:13307/1‑149 (MQ=255)                                                                                                                                         cccGGTATCACATGGGCGTGATCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACTTTTGTTTGGCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCGCTTCTATTAAATAAGCCCACTTATTGCCaaaa            <  8:206385/149‑1 (MQ=255)                                                                                                                                          ccGGTTTCACATGGGCTTGAGCGTAGACCCGTTTGCCGGTGTTACCGTATGGGGAGCTGTTACTTTTCTTTGCCAGTGCTGAGTTCAGGTCCGGAATCCTTTGCTCAGCCCGTTCCCTTCTTTTAAATAACCCCAGTTATAGGCAAAAc           <  8:170778/149‑1 (MQ=255)                                                                                                                                          ccGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatcattcctcac            <  1:22435‑M2/148‑111 (MQ=255)                                                                                                                                          ccGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAAc           <  1:228174/149‑1 (MQ=255)                                                                                                                                           cGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatcattcctcacaa          <  5:74341‑M2/149‑113 (MQ=255)                                                                                                                                           cGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGtt                      <  5:266906/137‑1 (MQ=255)                                                                                                                                           cGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGtt                      >  6:266906/1‑137 (MQ=255)                                                                                                                                             gTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatcattcctcacaaca        <  3:2562‑M2/149‑115 (MQ=255)                                                                                                                                              tATCACgggcaaacgggtctacgctcaagcccatgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctacaatcattcctcacaacac       <  8:323382‑M1/149‑144 (MQ=255)                                                                                                                                               aTCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTta                     >  1:297941/1‑134 (MQ=255)                                                                                                                                               aTCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTta                     <  2:297941/134‑1 (MQ=255)                                                                                                                                                tCACgggcaaacgggtctacgctcaagcccatgtgataccgggcccctctgacggctgccaacccgcaatgtcggatcactcttgccttgcaacgtcgacattcaaggaggggctcatgacacctaagcaatcattcctcacaacacct     >  8:217382‑M1/1‑4 (MQ=255)                                                                                                                                                  acaTGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatc                     >  8:113109‑M2/1‑30 (MQ=255)                                                                                                                                                   caTGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGaaa  <  3:360750/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CAGCCACAACCAGGCGCTGGTACCGAGGACAGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAA  >  NC_002947/2786606‑2786900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.