New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2786752	49 (0.830)	5 (0.090)	5/240	NT	9.0%	intergenic (‑84/‑238)	alx/ahpC	alkaline‑induced transporter/peroxiredoxin/alkylhydroperoxide reductase small subunit
	?	NC_002947	= 2786780	55 (1.000)					intergenic (‑112/‑210)	alx/ahpC	alkaline‑induced transporter/peroxiredoxin/alkylhydroperoxide reductase small subunit

AGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGAGCCTTCAGC  >  NC_002947/2786636‑2786928                                                                                                                                                 |                                                                                                                                                     aGGTGTTGTGAGGAATGATTGCTTAGGTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAAGAGTGATCCGACATTGCGGGTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtga                                                                                                                                                  >  8:217382‑M2/1‑145 (MQ=255)   gtgtTGTGAGGAATGATTGTAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgata                                                                                                                                                <  8:323382‑M2/149‑7 (MQ=255)          gAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAAt                                                                                                                                          <  8:208961/148‑1 (MQ=255)                   ttGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGa                                                                                                                                     >  4:204732/1‑144 (MQ=255)                   ttGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGa                                                                                                                                     <  3:204732/144‑1 (MQ=255)                             gTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCtt                                                                                                                      >  7:80316/1‑149 (MQ=255)                              tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCttt                                                                                                                     <  7:323382/149‑1 (MQ=255)                              tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCttt                                                                                                                     >  1:272354/1‑149 (MQ=255)                              tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCt                                                                                                                       <  4:341289/147‑1 (MQ=255)                              tCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACAAGGGCTTGAGCGTAGACACGTTTGCCCGTGATACCGAATGGGGAGCTCTTACAtttatat                                                                                                                     >  7:170778/1‑145 (MQ=255)                               cATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTg                                                                                                                    >  7:144035/1‑149 (MQ=255)                                aTGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGc                                                                                                                   <  5:164582/149‑1 (MQ=255)                                aTGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCCACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGATTGCCCGTGATACCGAATGGCGAGCTGTTACATTTCTTTGc                                                                                                                   >  5:93873/1‑149 (MQ=255)                                       cctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                                              >  2:228174/1‑147 (MQ=255)                                       cctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                                              >  5:118921/1‑147 (MQ=255)                                        ctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                                              >  2:124883/1‑146 (MQ=255)                                        ctcctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTg                                                                                                              >  4:227334/1‑146 (MQ=255)                                           ctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGTGTAGACCCGTTTGCCCGTGATACCGAATg                                                                                                                                         <  6:380980/116‑1 (MQ=255)                                           ctTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGTGTAGACCCGTTTGCCCGTGATACCGAATg                                                                                                                                         >  5:380980/1‑116 (MQ=255)                                             tGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGCCCCGTTTGCCCGGGATACGGAATGGGGAGATGTTACATTTCTTTGACAGTGCAGAGtt                                                                                                       >  7:206385/1‑148 (MQ=255)                                               aaTGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCa                                                                                                     <  1:124883/148‑1 (MQ=255)                                                            cAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCtt                                                                                       <  8:80316/149‑1 (MQ=255)                                                             aaGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCttt                                                                                      >  6:184601/1‑149 (MQ=255)                                                             aaGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCttt                                                                                      >  7:270069/1‑149 (MQ=255)                                                                gCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCt                                                                                   <  2:272354/149‑1 (MQ=255)                                                                  aaCAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCt                                                                                   >  4:360750/1‑147 (MQ=255)                                                                          tCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTc                                                                         >  6:103088/1‑149 (MQ=255)                                                                              aCATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCtt                                                                     >  2:241670/1‑149 (MQ=255)                                                                               cATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTc                                                                    <  6:93873/149‑1 (MQ=255)                                                                                 tGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTa                                                                  <  5:103088/149‑1 (MQ=255)                                                                                   gcggcTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTAt                                                                 <  5:184601/148‑1 (MQ=255)                                                                                     ggcTTGGCAGCAGTCAGAGGGGCCCGGTATCACATGGGCTTTATCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGATGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGAAATACTTTGATAAGCCCGTTCCCTTCTATTa                                                               >  5:71544/1‑148 (MQ=255)                                                                                      gcTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTaaa                                                             <  6:118921/149‑1 (MQ=255)                                                                                           gCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAcc                                                        >  2:134820/1‑149 (MQ=255)                                                                                           gCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAc                                                         <  8:144035/148‑1 (MQ=255)                                                                                             aGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAccc                                                       >  8:5310/1‑148 (MQ=255)                                                                                              gCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCa                                                     <  1:241670/149‑1 (MQ=255)                                                                                               ccGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAg                                                    >  2:309199/1‑149 (MQ=255)                                                                                                     gagGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTtata                                               <  2:110278/148‑1 (MQ=255)                                                                                                     gagGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTta                                                 >  1:110278/1‑146 (MQ=255)                                                                                                      agGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGc                                             >  8:13307/1‑149 (MQ=255)                                                                                                           cccGGTATCACATGGGCGTGATCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACTTTTGTTTGGCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCGCTTCTATTAAATAAGCCCACTTATTGCCaaaa                                        <  8:206385/149‑1 (MQ=255)                                                                                                            ccGGTTTCACATGGGCTTGAGCGTAGACCCGTTTGCCGGTGTTACCGTATGGGGAGCTGTTACTTTTCTTTGCCAGTGCTGAGTTCAGGTCCGGAATCCTTTGCTCAGCCCGTTCCCTTCTTTTAAATAACCCCAGTTATAGGCAAAAc                                       <  8:170778/149‑1 (MQ=255)                                                                                                            ccGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatcattcctcac                                        <  1:22435‑M2/148‑111 (MQ=255)                                                                                                            ccGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAAc                                       <  1:228174/149‑1 (MQ=255)                                                                                                             cGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatcattcctcacaa                                      <  5:74341‑M2/149‑113 (MQ=255)                                                                                                             cGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGtt                                                  >  6:266906/1‑137 (MQ=255)                                                                                                             cGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGtt                                                  <  5:266906/137‑1 (MQ=255)                                                                                                               gTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatcattcctcacaaca                                    <  3:2562‑M2/149‑115 (MQ=255)                                                                                                                 aTCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTta                                                 >  1:297941/1‑134 (MQ=255)                                                                                                                 aTCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTta                                                 <  2:297941/134‑1 (MQ=255)                                                                                                                    acaTGGGCTTGAGCGTAGACCCGTTTGCCCgtgataccgggcccctctgacggctgccaagccgccatgtcggatcactgttgccttgcaacgtcgacattcaaggaggggctcatgacagctctgcaatc                                                 >  8:113109‑M2/1‑30 (MQ=255)                                                                                                                     caTGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGaaa                              <  3:360750/149‑1 (MQ=255)                                                                                                                       tgtggttGAGATTAGAACAGTTTGACCGTGATACCGAATGGTGAGTTGTTTCATTTCTTTTCAAGTTCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCATTCTATTAAATAACCCCAGTTATAGCCAATACCAATCGAAAGc                            <  6:71544/144‑1 (MQ=255)                                                                                                                       tgtgCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGc                            <  8:270069/146‑1 (MQ=255)                                                                                                                              gAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCt                     >  3:132388/1‑149 (MQ=255)                                                                                                                               aGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCtt                    >  5:95071/1‑149 (MQ=255)                                                                                                                                gCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAc                                                         >  6:130460/1‑111 (MQ=255)                                                                                                                                gCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAAc                                                         <  5:130460/111‑1 (MQ=255)                                                                                                                                 cGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCttt                   <  3:227334/148‑1 (MQ=255)                                                                                                                                     gACCCGTTTGCCCgtgattccgggcgcctatgacgggtgccaagccgccatgtcggatcactgttgccttgcaaggtcgacattcatggtggggctcatgacagctctgcaatcattcctcacatgacctgtcatcggtaccagcgcc               >  6:74341‑M2/1‑13 (MQ=255)                                                                                                                                      aCCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTAAGGTCAGCAATCCTTTGCTAAGCCCGTTCCCTTATATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGAATGAGCttttcaaa              >  8:6665/1‑143 (MQ=255)                                                                                                                                        ccGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAAt             >  8:166400/1‑147 (MQ=255)                                                                                                                                        ccGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGa           <  1:134820/149‑1 (MQ=255)                                                                                                                                          gTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGAGc         <  7:5310/149‑1 (MQ=255)                                                                                                                                                ccGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGAGCCTTCAg   >  8:15754/1‑149 (MQ=255)                                                                                                                                                ccGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGAGCATTCAg   >  6:15121/1‑149 (MQ=255)                                                                                                                                                 cGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGAGCCTTCAGc  <  7:166400/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     AGGTGTTGTGAGGAATGATTGCAGAGCTGTCATGAGCCCCTCCTTGAATGTCGACGTTGCAAGGCAACAGTGATCCGACATGGCGGCTTGGCAGCCGTCAGAGGGGCCCGGTATCACATGGGCTTGAGCGTAGACCCGTTTGCCCGTGATACCGAATGGGGAGCTGTTACATTTCTTTGCCAGTGCAGAGTTCAGGTCCGCAATCCTTTGCTCAGCCCGTTCCCTTCTATTAAATAACCCCAGTTATAGCCAAAACCAATCGAAAGCATGAGCTTTGCCAATGAGCCTTCAGC  >  NC_002947/2786636‑2786928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.