New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3840186	68 (1.160)	4 (0.070)	4/246	NT	5.6%	coding (1109/1158 nt)	PP_3389	membrane protein
	?	NC_002947	= 3840209	71 (1.270)					coding (1132/1158 nt)	PP_3389	membrane protein

GGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCG  >  NC_002947/3840044‑3840329                                                                                                                                               |                                                                                                                                                  ggccTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCa                                                                                                                                              >  8:30321/1‑148 (MQ=255)       cccGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAgcgc                                                                                                                                        >  4:237975/1‑148 (MQ=255)       cccGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAgcgc                                                                                                                                        >  4:352129/1‑148 (MQ=255)        ccGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCaa                                                                                                                                      <  7:30321/149‑1 (MQ=255)          ggCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAgcaagcga                                                                                                                                    <  1:135303/149‑7 (MQ=255)            cAAGCCAGTCACAACCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTAGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCTAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCg                                                                                                                                   >  4:320194/1‑148 (MQ=255)               gCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAAc                                                                                                                               >  2:80323/1‑149 (MQ=255)               gCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCAAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAAc                                                                                                                               >  1:242572/1‑149 (MQ=255)                ccAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAAcc                                                                                                                              >  7:32318/1‑149 (MQ=255)                 cAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCACGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAACCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAACCCAAACCg                                                                                                                             >  1:350772/1‑149 (MQ=255)                      ccACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGctgc                                                                                                                        <  6:29320‑M2/149‑5 (MQ=255)                      ccACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGctgc                                                                                                                        <  4:357196‑M2/149‑5 (MQ=255)                        aCCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGctgcgc                                                                                                                      >  3:237975‑M2/1‑143 (MQ=255)                         cccGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGcc                                                                                                                   <  1:80323/149‑1 (MQ=255)                            gTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCaa                                                                                                                >  3:292239/1‑149 (MQ=255)                             tGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAAc                                                                                                               >  5:197628/1‑149 (MQ=255)                                    ccTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGAtt                                                                                                        >  2:79999/1‑149 (MQ=255)                                    ccTGAGCGACTACCCTCCCGCAATCCAGCCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCCAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAAAGAAGCtt                                                                                                        >  6:278504/1‑149 (MQ=255)                                     cTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtg                                                                                                       >  2:334431/1‑149 (MQ=255)                                        aGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtgt                                                                                                      <  1:334431/147‑1 (MQ=255)                                        aGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtgt                                                                                                      <  3:352129/147‑1 (MQ=255)                                         gCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTc                                                                                                   <  6:2061/149‑1 (MQ=255)                                          cGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCt                                                                                                  <  4:292239/149‑1 (MQ=255)                                           gatctcccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCt                                                                                                  <  1:124929/143‑1 (MQ=255)                                             cTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtg                                                                                                       >  1:113561/1‑141 (MQ=255)                                             cTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtg                                                                                                       <  2:113561/141‑1 (MQ=255)                                                 ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGccggtttcgcttgcgctttggatct                                                                                                                          >  7:300450‑M1/1‑95 (MQ=255)                                                 ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGccggtttcgcttgcgctttggatct                                                                                                                          <  8:300450‑M1/120‑26 (MQ=255)                                                 ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCt                                                                                                  >  2:124929/1‑142 (MQ=255)                                                 ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAAtt                                                                                             >  2:292027/1‑147 (MQ=255)                                                 ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCa                                                                                           <  1:79999/149‑1 (MQ=255)                                                 ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCa                                                                                           <  8:32318/149‑1 (MQ=255)                                                   tCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTgtgt                                                                                                    <  5:377517/138‑1 (MQ=255)                                                   tCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTgtgt                                                                                                    >  6:377517/1‑138 (MQ=255)                                                      cGCTATCCAGTCACGCCTGCTCTCCTACGGCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAAtt                                                                                      <  6:197628/149‑1 (MQ=37)                                                           tCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                                                 <  2:242572/149‑1 (MQ=255)                                                             cAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgt                                                                               >  3:85934/1‑149 (MQ=255)                                                                  aCGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTAcc                                                                          >  4:82140/1‑149 (MQ=255)                                                                    gCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTAcccc                                                                        <  5:29320/149‑1 (MQ=255)                                                                       tGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGc                                                                                                                                    <  7:344693/88‑1 (MQ=255)                                                                       tGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGc                                                                                                                                    >  8:344693/1‑88 (MQ=255)                                                                         cTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGa                                                                    <  7:29010/148‑1 (MQ=255)                                                                          tCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGccggtttcgcttgcgctttggatctgcgc                                                                                                                      >  4:139999‑M1/1‑70 (MQ=255)                                                                          tCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGccggtttcgcttgcgctttggatctgcgc                                                                                                                      <  3:139999‑M1/99‑30 (MQ=255)                                                                            gCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCAc                                                                <  4:249116/149‑1 (MQ=255)                                                                                  gCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGtt                                                          <  1:42781/149‑1 (MQ=255)                                                                                   ccGACCGCTGGCAGCTCAAGGCCGGCAAGGGGCCGGCGAAAAAGCGACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTAGCCCACGATCACCCGGTtc                                                         <  2:350772/149‑1 (MQ=255)                                                                                   ccGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                                         <  3:273414/149‑1 (MQ=255)                                                                                   ccGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                                         <  6:275184/149‑1 (MQ=255)                                                                                     gACCGCTGGCATCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCACGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                                         <  1:292027/149‑1 (MQ=255)                                                                                             gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTg                                               >  2:302541/1‑149 (MQ=255)                                                                                             gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTg                                               >  2:298374/1‑149 (MQ=255)                                                                                              cAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGc                                              <  4:47452/149‑1 (MQ=255)                                                                                               aGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCACATCCGCTGCa                                             <  6:293174/149‑1 (MQ=255)                                                                                                gCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCAt                                            <  6:357094/149‑1 (MQ=255)                                                                                                   cAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCgg                                         >  1:10814/1‑149 (MQ=255)                                                                                                    aaGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCgg                                         >  5:273699/1‑148 (MQ=255)                                                                                                       gcctgCAAGCGGCCTGCGAAAAAGCCACGCAAAACGAGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCaaa                                     <  4:85934/145‑1 (MQ=255)                                                                                                           gCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTc                                 <  2:10814/149‑1 (MQ=255)                                                                                                             aaGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGATTTCAGAATTCGAACGTGTACCCCACGATCACACGGTTCTCATCCGCTGCATCGGCAAAATTCGa                               <  8:72712/149‑1 (MQ=255)                                                                                                                 ggccggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAgcgc                           <  3:82140/149‑1 (MQ=255)                                                                                                                    cggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATg                        >  7:133523/1‑149 (MQ=255)                                                                                                                     ggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATg                        >  4:212671/1‑148 (MQ=255)                                                                                                                       cGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTc                     >  6:49810/1‑149 (MQ=255)                                                                                                                        gAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGa                               >  6:205875/1‑138 (MQ=255)                                                                                                                        gAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGa                               <  5:205875/138‑1 (MQ=255)                                                                                                                        gAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCg                    >  7:190678/1‑149 (MQ=255)                                                                                                                          aaaaGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCa                  <  3:357196/149‑1 (MQ=255)                                                                                                                              gCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCCTCGGCAAAATTCGAGCGCATGCTCGCATTgc              <  1:302541/149‑1 (MQ=255)                                                                                                                              gCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgc              >  6:255007/1‑149 (MQ=255)                                                                                                                              gCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgc              <  1:298374/149‑1 (MQ=255)                                                                                                                               ccACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgcg             <  5:255007/149‑1 (MQ=255)                                                                                                                                cACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCAt                                                     <  3:209767/108‑1 (MQ=255)                                                                                                                                cACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCAt                                                     >  4:209767/1‑108 (MQ=255)                                                                                                                                 aCGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgcgc            >  7:337931/1‑148 (MQ=255)                                                                                                                                       aaCGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACg       >  5:34836/1‑147 (MQ=255)                                                                                                                                          gcgcAGccggtttcgcttgcgctttggatctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagggtagtcgctcagggttgtcacgggt    >  3:237975‑M1/1‑6 (MQ=255)                                                                                                                                          gcgcAGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcga                                                      >  4:139999‑M2/1‑29 (MQ=255)                                                                                                                                          gcgcAGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcga                                                      <  3:139999‑M2/99‑71 (MQ=255)                                                                                                                                            gcAGccggtttcgcttgcgctttggatctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagggtagtcgctcagggttgtcacgggtgg  <  6:29320‑M1/149‑146 (MQ=255)                                                                                                                                            gcAGccggtttcgcttgcgctttggatctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagggtagtcgctcagggttgtcacgggtgg  <  4:357196‑M1/149‑146 (MQ=255)                                                                                                                                              aGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagg                             >  7:300450‑M2/1‑25 (MQ=255)                                                                                                                                              aGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagg                             <  8:300450‑M2/120‑96 (MQ=255)                                                                                                                                               |                                                                                                                                                  GGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCG  >  NC_002947/3840044‑3840329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.