New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3840186	68 (1.160)	4 (0.070)	4/246	NT	5.6%	coding (1109/1158 nt)	PP_3389	membrane protein
	?	NC_002947	= 3840209	71 (1.270)					coding (1132/1158 nt)	PP_3389	membrane protein

CCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAGCGCCCCCGACTGC  >  NC_002947/3840065‑3840355                                                                                                                                                 |                                                                                                                                                     ccACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGctgc                                                                                                                                                  <  4:357196‑M2/149‑5 (MQ=255) ccACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGctgc                                                                                                                                                  <  6:29320‑M2/149‑5 (MQ=255)   aCCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGctgcgc                                                                                                                                                >  3:237975‑M2/1‑143 (MQ=255)    cccGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGcc                                                                                                                                             <  1:80323/149‑1 (MQ=255)       gTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCaa                                                                                                                                          >  3:292239/1‑149 (MQ=255)        tGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAAc                                                                                                                                         >  5:197628/1‑149 (MQ=255)               ccTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGAtt                                                                                                                                  >  2:79999/1‑149 (MQ=255)               ccTGAGCGACTACCCTCCCGCAATCCAGCCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCCAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAAAGAAGCtt                                                                                                                                  >  6:278504/1‑149 (MQ=255)                cTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtg                                                                                                                                 >  2:334431/1‑149 (MQ=255)                   aGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtgt                                                                                                                                <  3:352129/147‑1 (MQ=255)                   aGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtgt                                                                                                                                <  1:334431/147‑1 (MQ=255)                    gCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTc                                                                                                                             <  6:2061/149‑1 (MQ=255)                     cGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCt                                                                                                                            <  4:292239/149‑1 (MQ=255)                      gatctcccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCt                                                                                                                            <  1:124929/143‑1 (MQ=255)                        cTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtg                                                                                                                                 <  2:113561/141‑1 (MQ=255)                        cTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATtg                                                                                                                                 >  1:113561/1‑141 (MQ=255)                            ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCt                                                                                                                            >  2:124929/1‑142 (MQ=255)                            ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAAtt                                                                                                                       >  2:292027/1‑147 (MQ=255)                            ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCa                                                                                                                     <  8:32318/149‑1 (MQ=255)                            ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCa                                                                                                                     <  1:79999/149‑1 (MQ=255)                              tCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTgtgt                                                                                                                              >  6:377517/1‑138 (MQ=255)                              tCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTgtgt                                                                                                                              <  5:377517/138‑1 (MQ=255)                                 cGCTATCCAGTCACGCCTGCTCTCCTACGGCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAAtt                                                                                                                <  6:197628/149‑1 (MQ=37)                                      tCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                                                                           <  2:242572/149‑1 (MQ=255)                                        cAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgt                                                                                                         >  3:85934/1‑149 (MQ=255)                                             aCGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTAcc                                                                                                    >  4:82140/1‑149 (MQ=255)                                               gCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTAcccc                                                                                                  <  5:29320/149‑1 (MQ=255)                                                    cTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGa                                                                                              <  7:29010/148‑1 (MQ=255)                                                       gCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCAc                                                                                          <  4:249116/149‑1 (MQ=255)                                                             gCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGtt                                                                                    <  1:42781/149‑1 (MQ=255)                                                              ccGACCGCTGGCAGCTCAAGGCCGGCAAGGGGCCGGCGAAAAAGCGACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTAGCCCACGATCACCCGGTtc                                                                                   <  2:350772/149‑1 (MQ=255)                                                              ccGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                                                                   <  6:275184/149‑1 (MQ=255)                                                              ccGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                                                                   <  3:273414/149‑1 (MQ=255)                                                                gACCGCTGGCATCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCACGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                                                                   <  1:292027/149‑1 (MQ=255)                                                                        gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTg                                                                         >  2:302541/1‑149 (MQ=255)                                                                        gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTg                                                                         >  2:298374/1‑149 (MQ=255)                                                                         cAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGc                                                                        <  4:47452/149‑1 (MQ=255)                                                                          aGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCACATCCGCTGCa                                                                       <  6:293174/149‑1 (MQ=255)                                                                           gCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCAt                                                                      <  6:357094/149‑1 (MQ=255)                                                                              cAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCgg                                                                   >  1:10814/1‑149 (MQ=255)                                                                               aaGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCgg                                                                   >  5:273699/1‑148 (MQ=255)                                                                                  gcctgCAAGCGGCCTGCGAAAAAGCCACGCAAAACGAGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCaaa                                                               <  4:85934/145‑1 (MQ=255)                                                                                      gCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTc                                                           <  2:10814/149‑1 (MQ=255)                                                                                        aaGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGATTTCAGAATTCGAACGTGTACCCCACGATCACACGGTTCTCATCCGCTGCATCGGCAAAATTCGa                                                         <  8:72712/149‑1 (MQ=255)                                                                                            ggccggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAgcgc                                                     <  3:82140/149‑1 (MQ=255)                                                                                               cggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATg                                                  >  7:133523/1‑149 (MQ=255)                                                                                                ggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATg                                                  >  4:212671/1‑148 (MQ=255)                                                                                                  cGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTc                                               >  6:49810/1‑149 (MQ=255)                                                                                                   gAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGa                                                         <  5:205875/138‑1 (MQ=255)                                                                                                   gAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGa                                                         >  6:205875/1‑138 (MQ=255)                                                                                                   gAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCg                                              >  7:190678/1‑149 (MQ=255)                                                                                                     aaaaGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCa                                            <  3:357196/149‑1 (MQ=255)                                                                                                         gCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCCTCGGCAAAATTCGAGCGCATGCTCGCATTgc                                        <  1:302541/149‑1 (MQ=255)                                                                                                         gCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgc                                        <  1:298374/149‑1 (MQ=255)                                                                                                         gCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgc                                        >  6:255007/1‑149 (MQ=255)                                                                                                          ccACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgcg                                       <  5:255007/149‑1 (MQ=255)                                                                                                           cACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCAt                                                                               <  3:209767/108‑1 (MQ=255)                                                                                                           cACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCAt                                                                               >  4:209767/1‑108 (MQ=255)                                                                                                            aCGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTgcgc                                      >  7:337931/1‑148 (MQ=255)                                                                                                                  aaCGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACg                                 >  5:34836/1‑147 (MQ=255)                                                                                                                     gcgcAGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcga                                                                                <  3:139999‑M2/99‑71 (MQ=255)                                                                                                                     gcgcAGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcga                                                                                >  4:139999‑M2/1‑29 (MQ=255)                                                                                                                         aGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagg                                                       >  7:300450‑M2/1‑25 (MQ=255)                                                                                                                         aGATCCAAAGCGCAAGCGAAACCGGctgcgcgttttgcgtggctttttcgccggccgcttgccgggcttgagctgccagcggtcggcgttggcgagcaggcgtgcctggattgcgggagg                                                       <  8:300450‑M2/120‑96 (MQ=255)                                                                                                                           aTCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACAt                      >  1:361192/1‑149 (MQ=255)                                                                                                                            tCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATcc                                                                             >  6:236650/1‑93 (MQ=255)                                                                                                                            tCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATcc                                                                             <  5:236650/93‑1 (MQ=255)                                                                                                                             ccAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTc                    >  1:59696/1‑149 (MQ=255)                                                                                                                             ccAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTc                    >  7:184107/1‑149 (MQ=255)                                                                                                                              cAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTcc                   >  4:310178/1‑149 (MQ=255)                                                                                                                               aaaGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCa                               <  7:254284/136‑1 (MQ=255)                                                                                                                               aaaGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCa                               >  8:254284/1‑136 (MQ=255)                                                                                                                                aaGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCt                  >  1:106/1‑148 (MQ=255)                                                                                                                                 aGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGa                <  8:337931/149‑1 (MQ=255)                                                                                                                                  gcgcAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAg               >  8:153784/1‑149 (MQ=255)                                                                                                                                   cgcAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAgc              <  2:59696/149‑1 (MQ=255)                                                                                                                                   cgcAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAgc              <  8:184107/149‑1 (MQ=255)                                                                                                                                       aGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAGCGccc          <  8:190678/149‑1 (MQ=255)                                                                                                                                          gAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAGCGccccc        >  7:338624/1‑148 (MQ=255)                                                                                                                                            aaCCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTc                    >  6:92005/1‑134 (MQ=255)                                                                                                                                            aaCCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTc                    <  5:92005/134‑1 (MQ=255)                                                                                                                                             aCCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAGCGCCCCCGACt    <  3:320194/149‑1 (MQ=255)                                                                                                                                               cGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAGCGCCCCCGACTGc  <  8:133523/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGCTGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTG‑‑CGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCATGCTCGCATTGCGCCAACGCAGCGACACATTCCTGAGCGCCCCCGACTGC  >  NC_002947/3840065‑3840355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.