New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3874713 =	49 (0.830)	4 (0.070)	4/246	NT	8.8%	coding (195/594 nt)	ltg	lytic transglycosylase
	?	NC_002947	3874795 =	36 (0.640)					coding (113/594 nt)	ltg	lytic transglycosylase

TGTGTCTGGCATCAGTTGCATCAACCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCACCCTTGGCATCGATTGAGATGTACACATCGGCCT  >  NC_002947/3874566‑3874858                                                                                                                                                     |                                                                                                                                                  tgtgTCTGGCATCAGTTGCATCAACCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAg                                                                                                                                                  >  3:191575/1‑149 (MQ=255)  ccacatcgggggccacgacgaagaggcgaccggcatgcgtggactcattatcggtttgatctggctggcggcaggtgctgcccaggccgatgtgtacatctcaatcgatgccaagggtggctacgtactgaccaatgtccatcgaccAg                                                                                                                                                  <  5:365207‑M1/2‑1 (MQ=255)   tgtCTGGCATCAGTTGCATCAACCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAgg                                                                                                                                                 <  2:188294/148‑1 (MQ=255)         gCATCAGTTGCATCAACCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCg                                                                                                                                          >  1:349217/1‑149 (MQ=255)           aTCAGTTGCATCAACCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGt                                                                                                                                        >  1:243372/1‑149 (MQ=255)                   cATCAACCCAACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGTCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCt                                                                                                                                >  6:220468/1‑149 (MQ=255)                        aCCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTTGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCt                                                                                                                           >  6:194037/1‑149 (MQ=255)                          cccACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCttt                                                                                                                         >  8:53295/1‑149 (MQ=255)                            cACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGa                                                                                                                       >  2:38036/1‑149 (MQ=255)                                cggcatgcgtggactcattatcggtttgatctggctggcggcaggtgctgcccaggccgatgtgtacatctcaatcgatgccaagggtggctacgtactgaccaatgtccatcgaccAGGGCGGCCGGTGATCATCTGCGCTTTGACCg                                                                                                                    <  1:138262‑M1/32‑1 (MQ=255)                                 cACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCgg                                                                                                                   <  4:114389/148‑1 (MQ=255)                                     cgcccgcGAACGGGCTTTGGGGTTGTAGCCGGACTTGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCAc                                                                                                              <  5:194037/149‑1 (MQ=255)                                     cgcccgcGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCAc                                                                                                              <  1:38036/149‑1 (MQ=255)                                     cgcccgcGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCAc                                                                                                              >  3:84959/1‑149 (MQ=255)                                          gcgAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTaa                                                                                                                                                   <  5:55736/107‑1 (MQ=255)                                          gcgAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTaa                                                                                                                                                   >  6:55736/1‑107 (MQ=255)                                                gggCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGc                                                                                                   >  7:92319/1‑149 (MQ=255)                                                gggCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTCGAGGCGCGCAGACGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGCTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGc                                                                                                   >  2:307851/1‑149 (MQ=255)                                                      tGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGc                                                                                                                 >  5:98532/1‑129 (MQ=255)                                                      tGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGc                                                                                                                 <  6:98532/129‑1 (MQ=255)                                                       ggggTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGc                                                                                            >  3:34011/1‑149 (MQ=255)                                                         ggTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTgg                                                                                                         <  4:239899/134‑1 (MQ=255)                                                         ggTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGACGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTAGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTgg                                                                                                         >  3:239899/1‑134 (MQ=255)                                                                gCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCt                                                                                   >  1:104257/1‑149 (MQ=255)                                                                 ccGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCtt                                                                                  >  7:47849/1‑149 (MQ=255)                                                                 ccGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCtt                                                                                  <  7:15625/149‑1 (MQ=255)                                                                       tCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCa                                                                              >  2:72480/1‑147 (MQ=255)                                                                        gcaggtgctgcccaggccgatgtgtacatctcaatcgatgccaagggtggctacgtactgaccaatgtccatcgaccAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATa                                                                            <  1:168035‑M1/72‑1 (MQ=255)                                                                         ggCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGTTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAgt                                                                          <  1:91798/149‑1 (MQ=255)                                                                         ggCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATa                                                                            <  8:226263/147‑1 (MQ=255)                                                                         ggCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATa                                                                            <  4:191575/147‑1 (MQ=255)                                                                          gCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATa                                                                            >  1:150069/1‑146 (MQ=255)                                                                          gCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATa                                                                            <  2:150069/146‑1 (MQ=255)                                                                             ttGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCg                                                                      >  8:14658/1‑149 (MQ=255)                                                                               gATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGc                                                                     <  8:92319/148‑1 (MQ=255)                                                                                aTCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGCGGACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGcc                                                                    >  1:282798/1‑149 (MQ=255)                                                                                aTCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGccc                                                                   <  8:47849/149‑1 (MQ=255)                                                                                 tCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTgg                                                                                                         >  1:32206/1‑110 (MQ=255)                                                                                 tCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTgg                                                                                                         <  2:32206/110‑1 (MQ=255)                                                                                 tCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCt                                                                  >  6:167901/1‑149 (MQ=255)                                                                                   aCCGCGTGCAGCAGCGCCGGCGGCGGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCTTGGGCCAGCGGCTCGCTGATCACCTTCTCa                                                                              <  5:221034/135‑1 (MQ=255)                                                                                   aCCGCGTGCAGCAGCGCCGGCGGCGGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCTTGGGCCAGCGGCTCGCTGATCACCTTCTCa                                                                              >  6:221034/1‑135 (MQ=255)                                                                                   aCCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTgg                                                                >  5:78403/1‑149 (MQ=255)                                                                                        ccgatgtgtacatctcaatcgatgccaagggtggctacgtactgaccaatgtccatcgaccAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGa                                                            >  2:138262‑M1/62‑149 (MQ=255)                                                                                         tGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATg                                                          <  7:53295/149‑1 (MQ=255)                                                                                            tgtgtacatctcaatcgatgccaagggtggctacgtactgaccaatgtccatcgaccAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGa                                                        >  2:168035‑M1/58‑149 (MQ=255)                                                                                                gcgcCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTg                                                   <  2:349217/149‑1 (MQ=255)                                                                                                gcgcCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTg                                                   <  4:34011/149‑1 (MQ=255)                                                                                                 cgcCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTgg                                                  <  4:84959/149‑1 (MQ=255)                                                                                                    cggcggCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCa                                               <  2:104257/149‑1 (MQ=255)                                                                                                    cggcggCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCa                                               <  7:14658/149‑1 (MQ=255)                                                                                                     ggcggcAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAg                                              <  6:78403/149‑1 (MQ=255)                                                                                                                     ggCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCACCCTTg                              <  5:220468/149‑1 (MQ=255)                                                                                                                        gcgcAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGc                                                                                                   <  4:149672/77‑1 (MQ=255)                                                                                                                        gcgcAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGc                                                                                                   >  3:149672/1‑77 (MQ=255)                                                                                                                              ccGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCACCCTTGGCATCGAtt                     <  5:167901/149‑1 (MQ=255)                                                                                                                                gTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCCCCCTTGGCATCGAtt                     >  4:292548/1‑147 (MQ=255)                                                                                                                                   gC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCACCCTTGGCATCGATTGAGAt                >  5:312512/1‑149 (MQ=255)                                                                                                                                                  gTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCACCCTTGGCATCGATTGAGATGTACACATCGGCCt  <  1:72480/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TGTGTCTGGCATCAGTTGCATCAACCCCACTGCACCCGCCCGCGAACGGGCTTTGGGGTTGTAGCCGGACTCGGCCTTGATCACCGCGTGCAGCAGCGCCGGCGGCAGGTTGTGGAGGCGCGCAGCCGTGGC‑GACTACCTCGGCGTAAGGGCGGCCGGTGATCATCTGCGCTTTGACCGGGCCACCCTGGGCCAGCGGCTCGCTGATCACCTTCTCATAGTGTCGCCCTGGTCGATGGACATTGGTCAGTACGTAGCCACCCTTGGCATCGATTGAGATGTACACATCGGCCT  >  NC_002947/3874566‑3874858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.