New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3962198	38 (0.650)	4 (0.070)	3/238	NT	10.0%	coding (396/1152 nt)	PP_3492	acyl‑CoA dehydrogenase
	?	NC_002947	= 3962291	37 (0.680)					coding (489/1152 nt)	PP_3492	acyl‑CoA dehydrogenase

CCACCGGGGCGATGATGAGCATCCACAACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTGGGCAAGAAAGGC  >  NC_002947/3962050‑3962345                                                                                                                                                     |                                                                                                                                                      ccACCGGGGCGATGATGAGCATCCACAACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGC                                                                                                                                                       <  8:226913‑M1/149‑1 (MQ=255)       gggCGATGATGAGCATCCACAACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAg                                                                                                                                                 <  5:192149/149‑1 (MQ=255)           gatgatGAGCATCCACAACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGgcg                                                                                                                                              >  5:371852/1‑148 (MQ=255)                tgaGCATCCACAACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAAc                                                                                                                                        <  2:353866/149‑1 (MQ=255)                         acaACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCAcc                                                                                                                               >  1:245657/1‑149 (MQ=255)                          caACTCGGTAGGTTGCGGCCCGCTCCTGGCCTACGGTACCGCCGAACACCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGTCGAGGTCATTGGCTGCTTCTGCCTGACCGAGCCCCAGCCCGGCTCCGAGGCGCACAACCTGCGCAccc                                                                                                                              >  5:80725/1‑149 (MQ=255)                               cGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCACGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGcc                                                                                                                       >  8:18194/1‑149 (MQ=255)                                ggTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGcc                                                                                                                       <  7:244324/148‑1 (MQ=255)                                     gTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCtg                                                                                                                 >  7:229832/1‑149 (MQ=255)                                      ttGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCtgg                                                                                                                <  4:259732/149‑1 (MQ=255)                                        gCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCtggt                                                                                                               <  4:93350/148‑1 (MQ=255)                                        gCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCtggt                                                                                                               <  3:288553/148‑1 (MQ=255)                                          ggCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCGGGTAGCCGAGCtggtg                                                                                                              >  1:312406/1‑149 (MQ=255)                                              cGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGc                                                                                                        <  6:371852/149‑1 (MQ=255)                                                                 cgccgAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCT‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTg                                                                                     <  7:18194/149‑1 (MQ=255)                                                                  gccgAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGc                                                                                    >  6:174036/1‑149 (MQ=255)                                                                      aacagcaacagcAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcg                                                                                  >  5:363863‑M1/1‑80 (MQ=255)                                                                        cagcaacagcaGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCAc                                                                                                                                >  4:263427/1‑101 (MQ=255)                                                                        cagcaacagcaGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCAc                                                                                                                                <  3:263427/101‑1 (MQ=255)                                                                         agcaacagcaGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggt                                                                               >  3:298313‑M1/1‑77 (MQ=255)                                                                         agcaacagcaGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAg                                                                             >  3:2079/1‑149 (MQ=255)                                                                                      gCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAAcg                                                                >  6:329638/1‑149 (MQ=255)                                                                                           cTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAAcgcccgc                                                           >  4:113054/1‑149 (MQ=255)                                                                                                cTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgc                                                      >  2:245657‑M2/1‑147 (MQ=255)                                                                                                    ccAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGTGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTTGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgccggc                                                  >  3:171555‑M2/1‑143 (MQ=255)                                                                                                    ccAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgccggc                                                  >  3:233178‑M2/1‑143 (MQ=255)                                                                                                     cAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgccggcc                                                 <  3:161647‑M2/149‑8 (MQ=255)                                                                                                        cggcgAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctgg                                                <  4:298313‑M1/149‑104 (MQ=255)                                                                                                        cggcgAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctgg                                                <  6:363863‑M1/149‑104 (MQ=255)                                                                                                        cggcgAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgccggcctgg                                              >  8:229832‑M2/1‑139 (MQ=255)                                                                                                               gTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCGGAGTCGGACAACCTGCGCACCCT‑‑CGCCTAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCTTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGt                                       <  6:80725/149‑1 (MQ=255)                                                                                                                tGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTc                                      >  7:31037/1‑149 (MQ=255)                                                                                                                  aTTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCtt                                    >  2:111987/1‑149 (MQ=255)                                                                                                                      gctgctTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGt                                                                                                    <  5:310354/81‑1 (MQ=255)                                                                                                                      gctgctTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGt                                                                                                    >  6:310354/1‑81 (MQ=255)                                                                                                                      gctgctTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCg                                  >  6:357158/1‑147 (MQ=255)                                                                                                                             cTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTgac                           <  3:113054/147‑1 (MQ=255)                                                                                                                                    aCCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCgg                   <  5:329638/148‑1 (MQ=255)                                                                                                                                      cGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgc                                                      <  6:301135‑M2/111‑3 (MQ=255)                                                                                                                                      cGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGc                >  6:174438/1‑149 (MQ=255)                                                                                                                                       gAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCt               <  7:43833/149‑1 (MQ=255)                                                                                                                                         gCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTgg             <  4:2079/149‑1 (MQ=255)                                                                                                                                          ccccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTgac                           <  1:277018/134‑1 (MQ=255)                                                                                                                                          ccccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTgac                           >  2:277018/1‑134 (MQ=255)                                                                                                                                          ccccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTggg            <  5:174438/149‑1 (MQ=255)                                                                                                                                           cccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCa                                                                      >  3:247393/1‑90 (MQ=255)                                                                                                                                           cccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCa                                                                      <  4:247393/90‑1 (MQ=255)                                                                                                                                           cccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTggg            >  7:77443/1‑148 (MQ=255)                                                                                                                                           cccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTGGGc           <  2:312406/149‑1 (MQ=255)                                                                                                                                            ccAGGCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctggggctcggtcaggcagaagcagccaatcacctcgccg            >  8:229832‑M1/1‑10 (MQ=255)                                                                                                                                            ccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgccggcctggggctcggtcaggcagaagcagccaatcacctcgccg          <  6:363863‑M2/149‑47 (MQ=255)                                                                                                                                            ccAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTgccggcctggggctcggtcaggcagaagcagccaatcacctcgccg          <  4:298313‑M2/149‑47 (MQ=255)                                                                                                                                               ggCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctggggctcggtcaggcagaagcagccaatcacctcgccgctg         <  3:161647‑M1/149‑143 (MQ=255)                                                                                                                                                gCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctggggctcggtcaggcagaagcagccaatcacctcgccgctgg        >  3:233178‑M1/1‑6 (MQ=255)                                                                                                                                                gCCGGCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccacaagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctggggcacggtcaggcagaagcagccaatcacctcgccgctgg        >  3:171555‑M1/1‑6 (MQ=255)                                                                                                                                                    gCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctggggctcggtcaggcagaagcagccaatcacctcgccgctggccag    >  2:245657‑M1/1‑2 (MQ=255)                                                                                                                                                    gCacggcgggcgttgctgacgaactgcttggcaccgttgatgacccactggccatccaccagctcggcgcgggtgcgcaggttgtgcgcctcggagccggcctggggctcg                                          <  6:301135‑M1/111‑110 (MQ=255)                                                                                                                                                    gCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTGGGCAAGAAAGGc  <  4:161647/149‑1 (MQ=255)                                                                                                                                                    gCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTGGGCAAGAAAGGc  <  5:357158/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CCACCGGGGCGATGATGAGCATCCACAACTCGGTAGGTTGCGGCCCGCTGCTGGCCTACGGTACCGCCGAACAGCAACAGCAGTGGCTGCCTCGCCTGGCCAGCGGCGAGGTGATTGGCTGCTTCTGCCTGACCGAGCCCCAGGCCGGCTCCGAGGCGCACAACCTGCGCACCCG‑‑CGCCGAGCTGGTGGATGGCCAGTGGGTCATCAACGGTGCCAAGCAGTTCGTCAGCAACGCCCGCCGTGCCGGCCTGGCGATCGTCTTCGCAGTGACCGACCCGGAGCTGGGCAAGAAAGGC  >  NC_002947/3962050‑3962345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.