New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4407246 =	48 (0.820)	5 (0.090)	4/248	NT	9.6%	coding (598/1299 nt)	PP_3889	putative Phage integrase
	?	NC_002947	4407282 =	48 (0.850)					coding (562/1299 nt)	PP_3889	putative Phage integrase

ATGCGGGTCTCACCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTAGGACAGGGACAGCTTGGCCTGGCCGGGCCA  >  NC_002947/4407098‑4407390                                                                                                                                                     |                                                                                                                                                 aagtacatcaccgccgagctgattgataagcacctgatctggcccggccaggccaagctgtccctgtcctacctgcgacagatgttcggcatgctgctgaccgccttccgccaggccttgaagctggggatgatcgatagcaatcccat                                                                                                                                                  <  1:138741‑M1/1‑1 (MQ=255) aTGCGGGTCTCACCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCtt                                                                                                                                                  <  7:274397/149‑1 (MQ=255)  tGCGGGTCTCACCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTg                                                                                                                                                 <  6:179486/149‑1 (MQ=255)  tGCGGGTCTCACCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTg                                                                                                                                                 <  7:164292/149‑1 (MQ=255)         ctcACCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTgg                                                                                                                                          >  1:36812/1‑149 (MQ=255)            aCCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTgg                                                                                                                                          <  4:326409/146‑1 (MQ=255)            aCCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGt                                                                                                                                         <  5:67465/147‑1 (MQ=255)            aCCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTg                                                                                                                                        >  3:9198/1‑148 (MQ=255)             ccGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTg                                                                                                                                        >  2:216770/1‑147 (MQ=255)                 tCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCg                                                                                                                                  >  6:58204/1‑149 (MQ=255)                            tGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCAc                                                                                                                       <  1:244772/149‑1 (MQ=255)                                cctgatctggcccggccaggccaagctgtcgactgtcctacctgcgacagatgttcggcatgctgctgaccgccttccgccaggccttgaagctggggatgatcgatagcaatcccaTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCg                                                                                                                   <  1:221905‑M1/32‑1 (MQ=255)                                ccAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCg                                                                                                                   <  3:349003/149‑1 (MQ=255)                                 cAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCgg                                                                                                                  <  7:40911/149‑1 (MQ=255)                                 cAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCgg                                                                                                                  <  5:96697/149‑1 (MQ=255)                                        atcaGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTg                                                                                                                                           >  6:362478/1‑117 (MQ=255)                                        atcaGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTg                                                                                                                                           <  5:362478/117‑1 (MQ=255)                                         tcaGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGa                                                                                                          >  1:60217/1‑149 (MQ=255)                                         tcaGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGa                                                                                                          <  5:198834/149‑1 (MQ=255)                                         ggcccggccaggccaagctgtccctgtcctacctgcgacagatgttcggcatgctgctgaccgccttccgccaggccttgaagctggggatgatcgatagcaatcccaTGGCCTTGGTGAAGGCGTTGAAGCGCACCCCGGCCATGGGa                                                                                                          >  4:248101‑M1/109‑149 (MQ=255)                                         ggcccggccaggccaagctgtccctgtcctacctgcgacagatgttcggcatgctgctgaccgccttccgccaggccttgaagctggggatgatcgatagcaatcccaTGGCCTTGGGGAAGTCGTTGAAGCGCACCCCGGCCATGGGa                                                                                                          >  7:200330‑M1/109‑149 (MQ=255)                                          gcccggccaggccaagctgtccctgtcctacctgcgacagatgttcggcatgctgctgaccgccttccgccaggccttgaagctgggtatgatcgatagcaatcccaTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCAt                                                                                                              >  2:221905‑M1/108‑144 (MQ=255)                                          gcccggccaggccaagctgtccctgtcctacctgcgacagatgttcggcatgctgctgaccgccttccgccaggccttgaagctggggatgatcgatagcaatcccaTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATgg                                                                                                            >  6:223248‑M1/108‑146 (MQ=255)                                          caGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTAGGACTTGGTGAAGTCGTTGAAGCGCACCACGGCCATGCGAt                                                                                                         >  2:221756/1‑149 (MQ=255)                                           aGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGAtt                                                                                                        <  4:21846/149‑1 (MQ=255)                                             gtccAGCATGGCGTAATTCGGGGCTTCCTCGAAGGGCTGGGCCAGCTGCTGCTTCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTg                                                                                                       <  4:9198/146‑1 (MQ=255)                                               ccAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTa                                                                                                    >  4:14137/1‑149 (MQ=255)                                               ccAGCATGGCGTCAGTCGGGGCTGCCTCGAAGGCCTGCGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGGGAAGTCGGTGAAGCGCCCCCCGGCCAAGGGATTCCTa                                                                                                    >  6:102690/1‑149 (MQ=255)                                                cAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTAt                                                                                                   <  5:58204/149‑1 (MQ=255)                                                      ggCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATTTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATc                                                                                                  <  1:92653/144‑1 (MQ=255)                                                      ggCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATc                                                                                                  >  2:92653/1‑144 (MQ=255)                                                         gTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATcc                                                                                          >  5:49429/1‑149 (MQ=255)                                                          tCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATccc                                                                                         <  2:36812/149‑1 (MQ=255)                                                           cATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATccc                                                                                         >  1:156112/1‑148 (MQ=255)                                                            aTTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCa                                                                                       <  5:150525/149‑1 (MQ=255)                                                                   gCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCaa                                                                                <  8:275553/149‑1 (MQ=255)                                                                        cTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGGAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCt                                                                           >  4:189175/1‑149 (MQ=255)                                                                           gAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGt                                                                                                                                 <  3:322304/92‑1 (MQ=255)                                                                           gAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGt                                                                                                                                 >  4:322304/1‑92 (MQ=255)                                                                                 cTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAgg                                                                  >  2:138741/1‑149 (MQ=255)                                                                                    ggCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCg                                                                <  6:49429/148‑1 (MQ=255)                                                                                      ccAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGt                                                              >  1:198196/1‑148 (MQ=255)                                                                                          ctgctgCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTcagca                                                         <  1:216770/149‑1 (MQ=255)                                                                                           tgctgcATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTcagcag                                                        >  8:248983/1‑149 (MQ=255)                                                                                             ctgcATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCagcagc                                                       <  7:248983/148‑1 (MQ=255)                                                                                                cATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATg                                                    <  3:330597/148‑1 (MQ=255)                                                                                                cATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGc                                                   >  1:284118/1‑149 (MQ=255)                                                                                                 aTCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGcc                                                  <  2:198196/149‑1 (MQ=255)                                                                                                    aGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGa                                                <  1:221756/148‑1 (MQ=255)                                                                                                            cAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACGCGGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTc                                       <  5:102690/149‑1 (MQ=255)                                                                                                                   aCGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTa                                <  2:284118/149‑1 (MQ=255)                                                                                                                                  gccgccTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTAGGACAGGGACAGCtt                 >  2:241825/1‑149 (MQ=255)                                                                                                                                   ccgccTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTa                                <  7:228372/133‑1 (MQ=255)                                                                                                                                   ccgccTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTa                                >  8:228372/1‑133 (MQ=255)                                                                                                                                          gggCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTAGGACAGGGACAGCTtgtcctg           <  2:156112/147‑1 (MQ=255)                                                                                                                                            gCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTAAGACAGGGACAGCTTGGCCTGGCCg       >  6:91177/1‑149 (MQ=255)                                                                                                                                             cAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTAGGACAGGGACAGCTTGGCCTGGCCgg      <  3:14137/149‑1 (MQ=255)                                                                                                                                                  tCTTGGCCTTGGTGATGTCTTTGAAGCGCACCCCGGCCATGGGATTGATATCTATCATCCCCAGCTTCAAGGCCGGGCGGATGGCGGTCAGCAGCATGCCTAACATGTGTCGATGGTAGGACAGGGACAGCTTGGCCTGGCCGGGCCa  <  1:241825/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 ATGCGGGTCTCACCGATCCGGGTACCGTGGGCCAGCATCATCAGGGCCAGCATGGCGTCATTCGGGGCTGCCTCGAAGGCCTGGGCCAGCTGCTGCATCAGCTCCGGCAACTGCACGCTGCGCAGGCGGGCCGCCTTGGGCAGGATCTTGGCCTTGGTGAAGTCGTTGAAGCGCACCCCGGCCATGGGATTGCTATCGATCATCCCCAGCTTCAAGGCCTGGCGGAAGGCGGTCAGCAGCATGCCGAACATCTGTCGCAGGTAGGACAGGGACAGCTTGGCCTGGCCGGGCCA  >  NC_002947/4407098‑4407390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.