New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4474813 | 51 (0.870) | 3 (0.050) | 3/242 | NT | 5.8% | coding (723/1536 nt) | PP_3964 | transposase |
? | NC_002947 | = 4474834 | 50 (0.910) | coding (702/1536 nt) | PP_3964 | transposase |
GTAAACCACCGCTTTGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATC > NC_002947/4474672‑4474960 | gTAAACCACCGCTTTGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGt < 6:214102/148‑1 (MQ=255) gTAAACCACCGCTTTGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTg > 6:195377/1‑149 (MQ=255) accaccGCTTTGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATc < 1:364168/149‑1 (MQ=255) accGCTTTGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGAc < 3:243773/149‑1 (MQ=255) tGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTgg < 2:224079/148‑1 (MQ=255) aCGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCAgccactggtcgatgcactgcgtgaagccgtgct < 5:191422‑M1/149‑34 (MQ=255) tcgtGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGtt > 4:88968/1‑149 (MQ=255) gCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTc > 3:150540/1‑149 (MQ=255) gCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTc > 7:64711/1‑149 (MQ=255) tGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTcc > 2:42089/1‑148 (MQ=255) gTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGa > 1:136524/1‑149 (MQ=255) cccAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCAc < 8:99393/149‑1 (MQ=255) ccAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCAgccactggtcgatgcactgcgtgaagccgtgc < 2:241987‑M1/129‑33 (MQ=255) ccAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCAgccactggtcgatgcactgcgtgaagccgtgc > 1:241987‑M1/1‑97 (MQ=255) ccAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACt > 5:235341/1‑149 (MQ=255) ccAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACt > 5:339771/1‑149 (MQ=255) aTAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCTTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCa < 8:229783/149‑1 (MQ=255) aTAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTgcgc > 5:134965/1‑147 (MQ=255) aTAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCa < 1:219386/149‑1 (MQ=255) gTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCgagcgagc < 5:186702/149‑1 (MQ=255) ttttCTTCTCGCCTGGCGCAAGCATTTGCACCGGTGGTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTcgagcgag > 1:242638/1‑148 (MQ=255) ttttCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCa < 8:226656/149‑1 (MQ=255) ttcttcTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGAACAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAAt > 4:285911/1‑149 (MQ=255) cttctCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAAtt < 2:120684/148‑1 (MQ=255) tctcGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTc > 8:293520/1‑134 (MQ=255) tctcGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTc < 7:293520/134‑1 (MQ=255) tcGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAg > 3:174800/1‑149 (MQ=255) gcAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACg > 7:356172/1‑149 (MQ=255) gcAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACg > 7:252445/1‑149 (MQ=255) aGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGc > 8:177919/1‑148 (MQ=255) gCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGTcc > 4:281367/1‑148 (MQ=255) gCACGGGT‑GTCTCATCAGCGTGGATCACTCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGAt < 5:328026/148‑1 (MQ=255) aCCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCgg < 2:216497/133‑1 (MQ=255) ccGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTTCCAGCCCGGCACGGCCAAAGATTTtc > 5:302520/1‑149 (MQ=255) ccGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTtc < 4:150540/149‑1 (MQ=255) t‑gtCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCt < 8:64711/149‑1 (MQ=255) tctcATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGc < 8:252445/149‑1 (MQ=255) tcatcaGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTtc < 3:146345/141‑1 (MQ=255) tcatcaGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTtc > 4:146345/1‑141 (MQ=255) atcaGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGACgg > 7:84881/1‑148 (MQ=255) tGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCgg < 2:242638/149‑1 (MQ=255) aTCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGc > 8:149428/1‑147 (MQ=255) aTCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGc > 8:144548/1‑147 (MQ=255) aTCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCaa < 2:136524/149‑1 (MQ=255) cACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAg < 6:339771/148‑1 (MQ=255) aCGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGt < 8:356172/148‑1 (MQ=255) gCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGAt < 3:88968/149‑1 (MQ=255) cccTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATc < 3:281367/149‑1 (MQ=255) cTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCgg < 5:195377/149‑1 (MQ=255) ttCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCaa > 4:352971/1‑148 (MQ=255) aGCACGGCTTCACGCAGTGCATCGACCAGTGGCtgaagccgtgctgaatcagggcgtgatccacgctgatgagacaccggtgcaaatgcttgcgccaggcgagaagaaaacccaccgggcctatgtctgggcgtacagcacgacgccgt < 5:191422‑M2/149‑117 (MQ=255) gCACGGCTTCACGCAGTGCATCGACCAGTGGCtgaagccgtgctgaatcagggcgtgatccacgctgatgagacaccggtgcaaatgcttgcgccaggcgagaagaaaacccaccgggcctatgtctgg > 1:241987‑M2/1‑32 (MQ=255) gCACGGCTTCACGCAGTGCATCGACCAGTGGCtgaagccgtgctgaatcagggcgtgatccacgctgatgagacaccggtgcaaatgcttgcgccaggcgagaagaaaacccaccgggcctatgtctgg < 2:241987‑M2/129‑98 (MQ=255) gCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTa < 2:29358/124‑1 (MQ=255) gCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTa > 1:29358/1‑124 (MQ=255) gCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTg > 1:345208/1‑149 (MQ=255) gCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTg < 7:177919/149‑1 (MQ=255) aCGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCGGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATc < 8:84881/148‑1 (MQ=255) | GTAAACCACCGCTTTGAGCCCTGAAAACGGCGTCGTGCTGTACGCCCAGACATAGGCCCGGTGGGTTTTCTTCTCGCCTGGCGCAAGCATTTGCACCGGT‑GTCTCATCAGCGTGGATCACGCCCTGATTCAGCACGGCTTCACGCAGTGCATCGACCAGTGGCTGAAGCCGCACGCCGGTTTGTCCGACCCACTGCGCCAGGGTCGAGCGAGCAATTGCCAGCCCGGCACGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATC > NC_002947/4474672‑4474960 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |