New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4482286 =	44 (0.750)	4 (0.070)	4/244	NT	8.7%	coding (292/987 nt)	PP_3974	LysR family transcriptional regulator
	?	NC_002947	4482349 =	42 (0.750)					coding (355/987 nt)	PP_3974	LysR family transcriptional regulator

CGCGCCGCTACGGCCAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGCCGATCATCGCGGACTTCAAAGCCC  >  NC_002947/4482139‑4482433                                                                                                                                                    |                                                                                                                                                    cgcgCCGCTACGGCCAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCt                                                                                                                                                    <  6:324636/149‑1 (MQ=255)   cgccgcTACGGCCAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTgg                                                                                                                                                  <  4:68656/149‑1 (MQ=255)    gccgcTACGGCCAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGc                                                                                                                                                 <  8:230973/149‑1 (MQ=255)     cttgccaaactcaacgtctggttgccgaccaacacctcgatggtaatcccctcattgagggctttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGcc                                                                                                                                                <  2:104600‑M1/6‑1 (MQ=255)     cttgccaaactcaacgtctggttgccgaccaacacctcgatggtaatcccctcattgagggctttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGcc                                                                                                                                                <  2:196598‑M1/6‑1 (MQ=255)     ccgcTACGGCCAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGcc                                                                                                                                                <  5:58866/149‑1 (MQ=255)        gccaaactcaacgtctggttgccgaccaacacctcgatggtaatcccctcattgagggctttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGCCg                                                                                                                                               >  7:131312‑M1/141‑147 (MQ=255)              ccAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGtt                                                                                                                                       >  2:77650/1‑149 (MQ=255)               cAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGtt                                                                                                                                       >  6:262654/1‑148 (MQ=255)                  gaagCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGc                                                                                                                                   >  3:168576/1‑149 (MQ=255)                  gaagCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGATGAGc                                                                                                                                   >  5:93998/1‑149 (MQ=255)                    agCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTg                                                                                                                                 <  4:35917/149‑1 (MQ=255)                               aaTGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCa                                                                                                                       <  3:118618/148‑1 (MQ=255)                               aaTGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAg                                                                                                                      >  3:61874/1‑149 (MQ=255)                               aaTGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAg                                                                                                                      >  5:69090/1‑149 (MQ=255)                               aaTGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTACTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCa                                                                                                                       <  7:122618/148‑1 (MQ=255)                                     tCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCAc                                                                                                                <  4:168576/149‑1 (MQ=255)                                      ccACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCAcc                                                                                                               >  4:301973/1‑149 (MQ=255)                                      ccACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCAca                                                                                                               >  7:119584/1‑148 (MQ=255)                                       cACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCAccc                                                                                                              >  5:319452/1‑149 (MQ=255)                                        aCCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAgtg                                                                                                                    <  6:129572/142‑1 (MQ=255)                                        aCCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAgtg                                                                                                                    >  5:129572/1‑142 (MQ=255)                                        aCCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCg                                                                                                             >  1:360227/1‑149 (MQ=255)                                                gcgcCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGgtgt                                                                                                     >  8:25759/1‑149 (MQ=255)                                                    cGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCcg                                                                                                 >  6:260596/1‑149 (MQ=255)                                                           cgcAATTTGAGAAGACGCTTGGCGTCGCGCTTTTCGATCATCGAAAGGCGAGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTAGCCGATCGCCTTCAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCTCGCCGGc                                                                                          >  7:211371/1‑149 (MQ=255)                                                            gcAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGcc                                                                                         <  8:119584/149‑1 (MQ=255)                                                              agggctttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAg                                                                                       >  3:140633‑M1/87‑149 (MQ=255)                                                                gtctttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAggg                                                                                     >  8:340807‑M1/85‑149 (MQ=255)                                                                   tttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCgg                                                                                           >  4:270518‑M1/82‑140 (MQ=255)                                                                   tttgaagtccgcgatgatcggcgtgagaaagtacaacagcagcgagtcgctggtagtgattcgcagctttcccaaggggccCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCgg                                                                                           <  3:270518‑M1/59‑1 (MQ=255)                                                                      aagaCGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCtt                                                                               <  1:6402/149‑1 (MQ=255)                                                                       agaCGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTg                                                                              <  5:262654/149‑1 (MQ=255)                                                                                 ggTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGc                                                                    <  4:77468/149‑1 (MQ=255)                                                                                 ggTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGc                                                                    <  6:319452/149‑1 (MQ=255)                                                                                     gcgcTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAAt                                                                >  5:13055/1‑149 (MQ=255)                                                                                       gcTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCATGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCa                                                              <  1:77650/149‑1 (MQ=255)                                                                                         ttttCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCa                                                                                                           >  5:313600/1‑102 (MQ=255)                                                                                         ttttCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCa                                                                                                           <  6:313600/102‑1 (MQ=255)                                                                                            tCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTAc                                                          <  1:197950/148‑1 (MQ=255)                                                                                              gATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCa                                                        <  7:25759/148‑1 (MQ=255)                                                                                               atcatcGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGc                                                      >  6:119455/1‑149 (MQ=255)                                                                                                  atcGGAAGTCGGGGTATCTGCTGTCTGCCGAATGCGTCGAGCTGCGTGGGCTGGGGGTGCTCGTTTAGCTGGACATCTTCAGTGTCACCCGCTGGGTGTCGTGCGCCGGCCAGGGCCGCTTGGGAAAGCTGCGAATCACTACCAgagaa                                                   <  8:211371/149‑2 (MQ=255)                                                                                                  atcGCAAGGCGGGGTATCTGCTGACTGCCTAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGAGTTGAGCTGGCCATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCCCTACCAGCGAc                                                   >  1:206325/1‑149 (MQ=255)                                                                                                   tcGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGc                                                      >  2:252541/1‑145 (MQ=255)                                                                                                   tcGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGc                                                      <  1:252541/145‑1 (MQ=255)                                                                                                     gCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTc                                                 <  5:119455/148‑1 (MQ=255)                                                                                                      cAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCgc                                               >  5:84126/1‑149 (MQ=255)                                                                                                         ggCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCgctgc                                            >  7:123464/1‑149 (MQ=255)                                                                                                             gggTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCtgtt                                        <  5:260596/149‑1 (MQ=255)                                                                                                                             ccGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGcc                         >  7:204963/1‑148 (MQ=255)                                                                                                                                   gCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGCCGatcatc                  >  3:240093/1‑149 (MQ=255)                                                                                                                                        gAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGCCGATCATCGCGGa             <  4:61874/149‑1 (MQ=255)                                                                                                                                              cgtgcgCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGCCGATCATCGCGGACTTCa        <  6:84126/148‑1 (MQ=255)                                                                                                                                               gtgcgCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTa                                     >  7:198799/1‑118 (MQ=255)                                                                                                                                               gtgcgCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTa                                     <  8:198799/118‑1 (MQ=255)                                                                                                                                                   gcTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGCCGATCATCGCGGACTTCAAAGccc  <  8:204963/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CGCGCCGCTACGGCCAAGAAGCTCGGCATCAATGTGTCCACCGTATCGCGCCGGGTCGCGCAAGTTGAGAAGACGCTTGGGGTCGCGCTTTTCGATCATCGCAAGGCGGGGTATCTGCTGACTGCCGAAGGCGTCGAGCTGCGTGCGCTGGCCGAGCGCGTTGAGCTGGACATCGTCAGTGTCACCCGCAGGGTGTCCCGCGCCGGCCAGGGCCCCTTGGGAAAGCTGCGAATCACTACCAGCGACTCGCTGCTGTTGTACTTTCTCACGCCGATCATCGCGGACTTCAAAGCCC  >  NC_002947/4482139‑4482433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.