New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4933522 =	58 (0.990)	4 (0.070)	3/240	NT	7.3%	coding (927/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933601 =	48 (0.880)					coding (848/1308 nt)	flhF	flagellar biosynthesis protein FlhF

AGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGC  >  NC_002947/4933376‑4933670                                                                                                                                                   |                                                                                                                                                     aGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTc                                                                                                                                                    <  6:321544/149‑1 (MQ=255)   gATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGc                                                                                                                                                  >  7:143610/1‑149 (MQ=255)       cAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTgg                                                                                                                                               <  7:68041/148‑1 (MQ=255)        aGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCt                                                                                                                                             >  6:338699/1‑149 (MQ=255)             gccaggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAg                                                                                                                                        >  4:66185/1‑149 (MQ=255)             gccaggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAg                                                                                                                                        >  8:78488/1‑149 (MQ=255)                   ccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGc                                                                                                                                  <  3:66185/149‑1 (MQ=255)                   ccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGc                                                                                                                                  <  7:78488/149‑1 (MQ=255)                    cacaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTg                                                                                                                                                <  8:228695/134‑1 (MQ=255)                    cacaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTg                                                                                                                                                >  7:228695/1‑134 (MQ=255)                    cacaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCgg                                                                                                                                   >  2:251729/1‑147 (MQ=255)                    cacaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCgg                                                                                                                                   >  3:52443/1‑147 (MQ=255)                     acaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAg                                                                                                                                >  2:301380/1‑149 (MQ=255)                     acaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAg                                                                                                                                >  3:288542/1‑149 (MQ=255)                           cTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGa                                                                                                                          >  7:118170/1‑149 (MQ=255)                           cTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGa                                                                                                                          <  3:23078/149‑1 (MQ=255)                              gTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGAt                                                                                                                         <  1:166267/147‑1 (MQ=255)                               tAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCa                                                                                                                       <  2:196937/148‑1 (MQ=255)                               tAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCa                                                                                                                       <  7:331503/148‑1 (MQ=255)                                       gTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCAcgc                                                                                                              <  1:251729/149‑1 (MQ=255)                                           gcggcgGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCtt                                                                                                          >  4:64052/1‑149 (MQ=255)                                            cggcggTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTg                                                                                                         >  3:290239/1‑149 (MQ=255)                                                      cACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTg                                                                                               >  8:187350/1‑149 (MQ=255)                                                         cTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGtt                                                                                            >  6:89677/1‑149 (MQ=255)                                                          tGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTc                                                                                           >  6:27902/1‑149 (MQ=255)                                                           gCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTc                                                                                           >  6:287676/1‑148 (MQ=255)                                                           gCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTc                                                                                           >  1:16978/1‑148 (MQ=255)                                                               ctggctggTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAg                                                                                        <  7:187350/147‑1 (MQ=255)                                                                  gctggTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATGGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCgctg                                                                                   >  2:166042/1‑149 (MQ=255)                                                                  cttccgtatcggcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCgctg                                                                                   <  2:211022‑M1/68‑1 (MQ=255)                                                                         gtggCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAg                                                                            <  5:27902/149‑1 (MQ=255)                                                                             gcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCTGCAGTGGTTCCAGCGCTGCTGCCAGCGAc                                                                        >  1:211022‑M1/71‑149 (MQ=255)                                                                              cAGCACCAGGTAGTTCTTCGCGACAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACt                                                                       >  1:280362/1‑149 (MQ=255)                                                                               aGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGGGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTg                                                                      <  8:76146/149‑1 (MQ=255)                                                                                    ggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGAc                                                                        <  4:292064‑M1/79‑1 (MQ=255)                                                                                    ggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGAc                                                                        >  3:292064‑M1/64‑142 (MQ=255)                                                                                       gTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTc                                                                                           >  7:209305/1‑120 (MQ=255)                                                                                       gTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTc                                                                                           <  8:209305/120‑1 (MQ=255)                                                                                        tAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTc                                                             >  7:62595/1‑149 (MQ=255)                                                                                          gTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGa                                                           >  3:228439/1‑149 (MQ=255)                                                                                            tcttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTc                                                             >  6:359180/1‑145 (MQ=255)                                                                                            tcttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTc                                                             <  5:359180/145‑1 (MQ=255)                                                                                            tcttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACg                                                         >  3:252681/1‑149 (MQ=255)                                                                                              ttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGt                                                        >  1:163463/1‑148 (MQ=255)                                                                                                cgcgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTaa                                                      <  8:62595/148‑1 (MQ=255)                                                                                                cgcgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTaa                                                      <  4:288542/148‑1 (MQ=255)                                                                                                 gcgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTaa                                                      >  6:242816/1‑147 (MQ=255)                                                                                                 gcgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTaa                                                      <  5:242816/147‑1 (MQ=255)                                                                                                  cgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTc                                                   <  2:16978/149‑1 (MQ=255)                                                                                                      aaTGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGTCCGGGTCGACGTAAGTCACCg                                               <  8:118170/149‑1 (MQ=255)                                                                                                      aaTGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCg                                               >  4:236608/1‑149 (MQ=255)                                                                                                          ccACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCAc                                           >  6:286063/1‑149 (MQ=255)                                                                                                           cACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACg                                          >  2:121053/1‑149 (MQ=255)                                                                                                              gCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGca                                                                                                                    >  5:182041/1‑72 (MQ=255)                                                                                                              gCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGca                                                                                                                    <  6:182041/72‑1 (MQ=255)                                                                                                               cccGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGa                                      <  4:290239/149‑1 (MQ=255)                                                                                                                        ggTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGc                             <  5:287676/149‑1 (MQ=255)                                                                                                                         gTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGAc                                                          >  5:241785/1‑119 (MQ=255)                                                                                                                         gTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGAc                                                          <  6:241785/119‑1 (MQ=255)                                                                                                                              cAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAggg                       >  2:291778/1‑149 (MQ=255)                                                                                                                                    cATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGa                 <  4:252681/149‑1 (MQ=255)                                                                                                                                     aTGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAg                <  2:280362/149‑1 (MQ=255)                                                                                                                                           aGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTc          <  4:228439/149‑1 (MQ=255)                                                                                                                                             tGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCt        <  3:64052/149‑1 (MQ=255)                                                                                                                                                   GTCGCTGGCTTGCAGGCCGGCAGTATGGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAgcgc  >  1:166042‑M1/1‑149 (MQ=255)                                                                                                                                                   GTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAgcgc  >  1:121053‑M1/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     AGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGC  >  NC_002947/4933376‑4933670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.