New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5256691	49 (0.830)	4 (0.070)	4/248	NT	8.0%	coding (185/342 nt)	PP_5703	type III effector protein HopJ
	?	NC_002947	= 5256717	45 (0.800)					coding (211/342 nt)	PP_5703	type III effector protein HopJ

GGCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGCCGCTTGC  >  NC_002947/5256546‑5256835                                                                                                                                                  |                                                                                                                                                     ggCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCt                                                                                                                                                   <  1:137066/149‑1 (MQ=255) ggCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCt                                                                                                                                                   <  5:78022/149‑1 (MQ=255)   ccAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGa                                                                                                                                                 <  8:176788/149‑1 (MQ=255)       cATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑Ga                                                                                                                                          >  2:284844/1‑149 (MQ=255)           tATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAg                                                                                                                                      >  2:302738/1‑149 (MQ=255)              ttGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAgg                                                                                                                                     >  8:336209/1‑147 (MQ=255)                  cGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAgc‑gc                                                                                                                              >  5:264128/1‑149 (MQ=255)                     tACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑gctgc                                                                                                                           <  2:5086/149‑1 (MQ=255)                       ccTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑Gctgctg                                                                                                                         <  3:167811/149‑1 (MQ=255)                        cTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTgg                                                                                                                        <  8:347028/149‑1 (MQ=255)                        cTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTgg                                                                                                                        >  5:79985/1‑149 (MQ=255)                           ggCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGcct                                                                                                                     <  4:308740‑M2/149‑4 (MQ=255)                             cGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGccagcagcgcttcctggtcgctcagcccttc                                                                                                                       <  1:245137‑M1/149‑32 (MQ=255)                              gTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGccagcagcgcttcctggtcgctcagcccttc                                                                                                                       >  7:138660‑M1/1‑117 (MQ=255)                              gTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑Gctgctg                                                                                                                         <  8:101781/142‑1 (MQ=255)                              gTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑Gctgctg                                                                                                                         >  7:101781/1‑142 (MQ=255)                               ttCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGccagcagcgcttcctggtcgctcagcccttcaa                                                                                                                     <  8:138660‑M1/149‑34 (MQ=255)                                 cATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGc                                                                                                                <  8:40419/148‑1 (MQ=255)                                  aTTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGa                                                                                                              <  5:315868/149‑1 (MQ=255)                                  aTTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGa                                                                                                              <  5:139677/149‑1 (MQ=255)                                     gCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGccagcagcgcttcctggtcgctcagcccttcaagcaag                                                                                                                <  8:22376‑M1/148‑39 (MQ=255)                                     gCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCa                                                                                                           >  2:75651/1‑149 (MQ=255)                                            aCTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGt                                                                                                    <  6:79985/149‑1 (MQ=255)                                             cTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGGAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGt                                                                                                    >  6:269411/1‑148 (MQ=255)                                             cTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTg                                                                                                   <  3:83621/149‑1 (MQ=255)                                                cAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGAt                                                                                                 <  2:166999/148‑1 (MQ=255)                                                cAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGAt                                                                                                 <  4:225833/148‑1 (MQ=255)                                                       cAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGc                                                                                         >  4:323436/1‑149 (MQ=255)                                                              aGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGCTGCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGcc                                                                                   <  1:75651/149‑1 (MQ=255)                                                              aGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCt                                                                                  >  8:187221/1‑149 (MQ=255)                                                                gCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCt                                                                                  >  8:124734/1‑147 (MQ=255)                                                                gCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGa                                                                                <  6:264128/149‑1 (MQ=255)                                                                 ccTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAg                                                                               <  5:16562/149‑1 (MQ=255)                                                                 ccTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAg                                                                               >  6:16562/1‑149 (MQ=255)                                                                      aacaacGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAg                                                                               >  8:6104/1‑144 (MQ=255)                                                                      aacaacGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAg                                                                               <  7:6104/144‑1 (MQ=255)                                                                       acaacGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGc                                                                         >  8:128002/1‑149 (MQ=255)                                                                                gcgTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGc                                                                <  3:323436/149‑1 (MQ=255)                                                                                          tGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGCGATGAGCAGGAAGC‑GATGATGGCCTACGGCGAGCGAAACCGTGATGTGTTGGCCCCGCGTGAGGGTAGCAACCATGCCAAAATcc                                                         >  1:296568/1‑149 (MQ=255)                                                                                            cGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCa                                                    <  3:308740/149‑1 (MQ=255)                                                                                            cGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCa                                                    <  7:124734/149‑1 (MQ=255)                                                                                             ggcagggcagAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCAc                                                   <  7:187221/149‑1 (MQ=255)                                                                                              gcagggcagAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACt                                                  <  7:336209/149‑1 (MQ=255)                                                                                                  ggcagAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGAt                                               >  1:271886/1‑148 (MQ=255)                                                                                                  ggcagAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATc                                              <  1:302738/149‑1 (MQ=255)                                                                                                                      aaaaCCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGt                          >  6:254474/1‑149 (MQ=255)                                                                                                                        aaCCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGa                        <  7:128002/149‑1 (MQ=255)                                                                                                                         aCCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTg                         >  3:296130/1‑147 (MQ=255)                                                                                                                          cccTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAg                      <  2:271886/149‑1 (MQ=255)                                                                                                                               ggccttgcctTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGttt                   <  1:284844/147‑1 (MQ=255)                                                                                                                               ggcctggcctTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTtgc                 <  5:254474/149‑1 (MQ=255)                                                                                                                                 cctggcctTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCa                                                    <  6:8412/112‑1 (MQ=255)                                                                                                                                      cctTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAg          <  4:296130/149‑1 (MQ=255)                                                                                                                                      cctTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAg          >  4:58336/1‑149 (MQ=255)                                                                                                                                       cttgcttgAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGccttcaagcaaggccaggcccagggttttgcacgaaccttcgttctgccctgccgcattctccacgccgccgttgttgaaggcctgcggctggtagctgtagttgtcggc          <  8:22376‑M2/148‑111 (MQ=255)                                                                                                                                        ttgcttgAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGcc        >  6:195052/1‑149 (MQ=255)                                                                                                                                            ttgAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGccttcaagcaaggccaggcccagggttttgcacgaaccttcgttctgccctgccgcattctccacgccgccgttgttgaaggcctgcggctggtagctgtagttgtcggcaatgaa    <  8:138660‑M2/149‑117 (MQ=255)                                                                                                                                            ttgAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGCCGCtt    >  7:96029/1‑149 (MQ=255)                                                                                                                                             tgAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGTTGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGCCGCTTg   >  1:282414/1‑149 (MQ=255)                                                                                                                                              gAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGccttcaagcaaggccaggcccagggttttgcacgaaccttcgttctgccctgccgcattctccacgccgccgttgttgaaggcctgcggctggtagctgtagttgtcggcaatgaacg  <  1:245137‑M2/149‑119 (MQ=255)                                                                                                                                              gAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGccttcaagcaaggccaggcccagggttttgcacgaaccttcgttctgccctgccgcattctccacgccgccgttgttgaaggcctgcggctggtagctgtagttgtcggcaatgaac   >  7:138660‑M2/1‑31 (MQ=255)                                                                                                                                              gAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGCCGCtt    <  7:162667/147‑1 (MQ=255)                                                                                                                                              gAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGCCGCtt    <  3:58336/147‑1 (MQ=255)                                                                                                                                                aGGccagcagcgcttcctggtcgctcagcccttcaagcaaggccaggcccagggttttgcacgaaccttcgttctgccctgccgcattctccacgccgccgttgttgaaggcctgcggctggtagctgtagttgtcggcaatgaacgcc    <  4:308740‑M1/149‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GGCCAACATGTATTTGCCGATACCTTGGCGTTCATTGCCGACAACTACAGCTACCAGCCGCAGGCCTTCAACAACGGCGGCGTGGAGAATGCGGCAGGGCAGAACGAAGGTTCGTGCAAAACCCTGGGCCTGGCCTTGCTTGAAGGGCTGAGC‑‑‑GACCAGGAAGC‑GCTGCTGGCCTTCGGCGAGCACTACCGTGATGTGTTGGCCACGCCTGAGGGTAGCGACCATGGCAACATCCGTGCACTGATCAAACACGGTCTGGCGGGCGTGAAGTTTGCTGCGCAGCCGCTTGC  >  NC_002947/5256546‑5256835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.