New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1154814 =58 (0.990)3 (0.050) 3/240 NT 5.5% coding (678/726 nt) gltR‑II two‑component system response regulator
?NC_002947 1154888 = 49 (0.900)coding (46/1455 nt) PP_1013 sensor histidine kinase

GTCGACATGGCGGTCAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCATGAGTGC  >  NC_002947/1154740‑1155036
                                                                                                                                                    |                                                                                                                                                    
ccagataatgctggacaacccctgggccagcaggacaaccagcaaggtcagcagcagcatccgccccagcaggaGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCt                                                                                                                                                      >  3:88404‑M1/75‑149 (MQ=255)
       tGGCGGTCAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCt                                                                                                                                               <  1:92786/149‑1 (MQ=255)
           ggTCAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTgggg                                                                                                                                           <  2:211252/149‑1 (MQ=255)
            gTCAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGc                                                                                                                                          <  7:81413/149‑1 (MQ=255)
             tCAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTggggag                                                                                                                                         >  5:291130/1‑147 (MQ=255)
              cAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCg                                                                                                                                         >  5:137615/1‑148 (MQ=255)
              cAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCg                                                                                                                                         >  4:109595/1‑148 (MQ=255)
               aGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCgg                                                                                                                                        <  4:94639/148‑1 (MQ=255)
                gCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGAt                                                                                                                                      <  8:226652/149‑1 (MQ=255)
                gCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGAt                                                                                                                                      <  8:157410/149‑1 (MQ=255)
                    tCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGAtgctg                                                                                                                                  <  3:109595/149‑1 (MQ=255)
                        cgcCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGTGGAtgctgct                                                                                                                                <  6:291130/147‑1 (MQ=255)
                           cAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGc                                                                                                                                          >  6:341350/1‑134 (MQ=255)
                           cAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGc                                                                                                                                          <  5:341350/134‑1 (MQ=255)
                                    cgcgTTACCGACTAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTgg                                                                                                                  <  3:248549/149‑1 (MQ=255)
                                    agcgATACCGACAAGCCTCGCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCt                                                                                                                    <  6:224975/146‑1 (MQ=255)
                                            cGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCctg                                                                                                          >  5:205697/1‑149 (MQ=255)
                                            cGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCctg                                                                                                          >  6:299943/1‑149 (MQ=255)
                                             gACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCctgc                                                                                                         >  2:308625/1‑149 (MQ=255)
                                             gACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCctgc                                                                                                         >  1:85770/1‑149 (MQ=255)
                                             gACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCctgc                                                                                                         >  6:236536/1‑149 (MQ=255)
                                             gACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGAGGCTGCTGCTGACCTTGCTGGTTGTCctgc                                                                                                         <  1:134024/149‑1 (MQ=255)
                                              aCAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTcc                                                                                                                                                    >  5:28120/1‑105 (MQ=255)
                                              aCAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTcc                                                                                                                                                    <  6:28120/105‑1 (MQ=255)
                                                aaGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTgg                                                                                                      <  6:205697/149‑1 (MQ=255)
                                                  gCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGcc                                                                                                    >  7:355362/1‑149 (MQ=255)
                                                     tCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAg                                                                                                 >  8:174088/1‑149 (MQ=255)
                                                      ccccGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAgg                                                                                                >  2:269180/1‑149 (MQ=255)
                                                       cccGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGTTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAggg                                                                                               <  1:277758/149‑1 (MQ=255)
                                                        ccGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCACTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAgggg                                                                                              >  5:316491/1‑149 (MQ=255)
                                                                tCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGTACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGa                                                                                                                                       >  5:54972/1‑100 (MQ=255)
                                                                tCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGTACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGa                                                                                                                                       <  6:54972/100‑1 (MQ=255)
                                                                  cGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCa                                                                                    >  6:233031/1‑149 (MQ=255)
                                                                  cGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCa                                                                                    <  7:174088/149‑1 (MQ=255)
                                                                   gCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCAt                                                                                   >  3:96845/1‑149 (MQ=255)
                                                                    cACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCAt                                                                                   >  4:101224/1‑148 (MQ=255)
                                                                        gTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCt                                                                              <  2:85770/149‑1 (MQ=255)
                                                                         tGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTg                                                                             >  5:218867/1‑149 (MQ=255)
                                                                         agcgcggcagcaggcgccagcgccgctcagggcgcacagcagacatgtgccgccaacaagtagccactgccgcgcTCCTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTgg                                                                            >  3:88404‑M2/76‑149 (MQ=255)
                                                                            gcggcagcaggcgccagcgccgctcagggcgcacagcagacatgtgccgccaacaagtagccactgccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTggg                                                                           >  4:169805‑M2/73‑148 (MQ=255)
                                                                            GCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTggg                                                                           <  1:290705‑M1/148‑1 (MQ=255)
                                                                            GCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGt                                                                          >  8:355362‑M1/1‑149 (MQ=255)
                                                                            GCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGt                                                                          >  6:137615‑M1/1‑149 (MQ=255)
                                                                              GGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTcc                                                                                        <  2:331952‑M1/133‑1 (MQ=255)
                                                                              GGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTcc                                                                                        >  1:331952‑M1/1‑133 (MQ=255)
                                                                                     gCTACTTGTTGGCGGCACATCTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGCCGGATGCAGCTGCTGACCTTGCTGGTTGTCATGCTGGCCCAGTGGTAGTCCAGCAATAAATGGGTATCTCAGCt                                                                 >  8:182062/1‑149 (MQ=255)
                                                                                        aCTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTgcg                                                              >  6:148436/1‑149 (MQ=255)
                                                                                         cTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCa                                                                                    >  1:138819/1‑126 (MQ=255)
                                                                                         cTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCa                                                                                    <  2:138819/126‑1 (MQ=255)
                                                                                             ttgGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCgcca                                                         <  3:101224/149‑1 (MQ=255)
                                                                                                gcggcACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTg                                                                                           <  3:132609/112‑1 (MQ=255)
                                                                                                gcggcACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTg                                                                                           >  4:132609/1‑112 (MQ=255)
                                                                                                  ggcACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGccagccag                                                    >  5:3034/1‑149 (MQ=255)
                                                                                                       aTGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTAtctc                                                                     <  4:55798/127‑1 (MQ=255)
                                                                                                       aTGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTAtctc                                                                     >  3:55798/1‑127 (MQ=255)
                                                                                                         gTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAgg                                             >  8:144652/1‑149 (MQ=255)
                                                                                                         cgcacagcagacatgtgccgccaacaagtagccactgccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAgg                                             <  3:169805‑M2/106‑1 (MQ=255)
                                                                                                             gctgTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTgg                                                                            <  5:106350/114‑1 (MQ=255)
                                                                                                             gctgTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTgg                                                                            >  6:106350/1‑114 (MQ=255)
                                                                                                                                gcTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCagcagc                      >  5:340073/1‑149 (MQ=255)
                                                                                                                                        ctgctgCCGCGCTCATAGCTCGGGCCGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTCGCCCAGGCGTTTTCCAGCATAATCAGCGTATCTCAGCTCCCCGCAAGCCAGCTTCAGGCGCTGCGTGCCACCGCCACAAGCCTGccgc               >  4:109299/1‑148 (MQ=255)
                                                                                                                                           ctgccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCAt             <  2:290705‑M2/138‑1 (MQ=255)
                                                                                                                                            tgccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTc           >  5:142766‑M2/9‑148 (MQ=255)
                                                                                                                                              ccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCa         <  6:340073‑M2/142‑1 (MQ=255)
                                                                                                                                              ccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCa         <  5:233031‑M2/142‑1 (MQ=255)
                                                                                                                                              ccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCAt        <  4:96845‑M2/143‑1 (MQ=255)
                                                                                                                                              ccgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCAt        <  7:182062‑M2/143‑1 (MQ=255)
                                                                                                                                               cgcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCATg       <  5:131029‑M2/144‑1 (MQ=255)
                                                                                                                                                gcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCagcagc                      <  7:116112‑M2/129‑1 (MQ=255)
                                                                                                                                                gcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCagcagc                      >  8:116112‑M2/5‑133 (MQ=255)
                                                                                                                                                gcgcTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCATGa      <  7:144652‑M2/145‑1 (MQ=255)
                                                                                                                                                   cTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCATGAGTg   <  1:269180‑M2/148‑1 (MQ=255)
                                                                                                                                                    tCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCATGAGTGc  >  4:53004/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GTCGACATGGCGGTCAGCCGTCTGCGCCAGCGCCTGCGCGATACCGACAAGCCTCCCCGGCTGATCCGCACGGTGCGCGGCAGTGGCTACTTGTTGGCGGCACATGTCTGCTGTGCGCCCTGAGCGGCGCTGGCGCCTGCTGCCGCGCTCCTTGCTGGGGCGGATGCTGCTGCTGACCTTGCTGGTTGTCCTGCTGGCCCAGGGGTTGTCCAGCATTATCTGGGTATCTCAGCTGCGCGCCAGCCAGCTTCAGGGGCTGCGTGCCAGCGCCAGCAGCCTGGCGCATTCCATGAGTGC  >  NC_002947/1154740‑1155036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.