New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2737153 =	39 (0.660)	3 (0.050)	3/248	NT	6.7%	coding (4051/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
	?	NC_002947	2737195 =	46 (0.810)					coding (4093/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein

GGTGCCCGGATGTGGCGGTTGGCGGTGCTTGAGCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGCACAAGACTTT  >  NC_002947/2737048‑2737340                                                                                                                                                     |                                                                                                                                                  acaggtaatcagcaatgccctcccgggtctgtcgcgccaggaccctttcacgggccaggagaaggtcctggttactcaaggcagggatccctgcatagagcatttcATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATg                                                                                                                                                   >  3:104833‑M1/107‑149 (MQ=255)    ggtaatcagcaatgccctcccgggtctgtcgcgccaggaccctttcacgggccaggagaaggtcctggttactcaaggcagggatccctgcatagagcatttcATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGaaa                                                                                                                                                >  6:898‑M1/104‑149 (MQ=255)     ccgggATGGGGGGGTTGCGGGGGCTTGAGCAATTTC‑CCGCTTAACATCCTTATGGGGGGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAAt                                                                                                                                               <  3:6207/145‑1 (MQ=255)     ccgggATGGGGCGGTGGGGGGTGC‑TGCACAAATTGCCCCCTCAACAGGCTAAGCGGGGGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATg                                                                                                                                              <  1:235323/146‑1 (MQ=255)        atcagcaatgccctcccgggtctgtcgcgccaggaccctttcacgggccaggagaaggtcctggttactcaaggcagggatccctgcatagagcatttcATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGct                                                                                                                                            >  2:194400‑M1/100‑149 (MQ=255)                 ggttggcggtGCTTGAGCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCGGGCCACCCCGATGAAATGATCTATGCAgg                                                                                                                                   >  6:355481/1‑148 (MQ=255)                               gAGCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAg                                                                                                                    >  4:53072/1‑149 (MQ=255)                                aGCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAg                                                                                                                    >  5:220138/1‑148 (MQ=255)                                 gCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGt                                                                                                                   >  5:330021/1‑148 (MQ=255)                                 gCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGt                                                                                                                   >  1:4181/1‑148 (MQ=255)                                   aaaTTC‑CCGCTCAACATGCGTTTCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATTAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAAc                                                                                                                <  6:68529/149‑1 (MQ=255)                                                aaCATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTtctc                                                                                                    >  6:207968/1‑149 (MQ=255)                                                   agcgttATCGGGGGGGGGCGGCCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTg                                                                                                 <  5:329860/145‑1 (MQ=255)                                                   aTGCTTATCGGGTGGGGGCGGGCACTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTg                                                                                                 >  1:355628/1‑149 (MQ=255)                                                          tCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGt                                                                                           <  3:79045/148‑1 (MQ=255)                                                            gggTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTaa                                                                                                                 >  6:123345/1‑124 (MQ=255)                                                                   ggcgggcgCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGc                                                                                               >  2:125783/1‑135 (MQ=255)                                                                   ggcgggcgCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGc                                                                                               <  1:125783/135‑1 (MQ=255)                                                                      gggcgCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAg                                                                                                             <  4:24927/118‑1 (MQ=255)                                                                      gggcgCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTgg                                                                              >  5:194674/1‑149 (MQ=255)                                                                         cgcTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGgcgc                                                                           <  2:4181/149‑1 (MQ=255)                                                                         cgcTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGgcgc                                                                           <  6:330021/149‑1 (MQ=255)                                                                                tcgatcgaATTCGCCTTGGCCTATAGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCAGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGAGCGACAGAc                                                                    >  3:50780/1‑149 (MQ=255)                                                                                  gatcgaATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGAccc                                                                  >  3:43292/1‑149 (MQ=255)                                                                                   atcgaATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCg                                                                 >  4:58191/1‑149 (MQ=255)                                                                                   atcgaATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCg                                                                 >  6:341790/1‑149 (MQ=255)                                                                                    tcgaATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCgg                                                                >  1:285230/1‑149 (MQ=255)                                                                                        aTTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAgg                                                            >  4:158913/1‑149 (MQ=255)                                                                                        aTTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAgg                                                            <  5:341790/149‑1 (MQ=255)                                                                                        aTTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAgg                                                            >  7:75995/1‑149 (MQ=255)                                                                                           cGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCa                                                         >  6:345536/1‑149 (MQ=255)                                                                                            gCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCAt                                                        <  4:43292/149‑1 (MQ=255)                                                                                                   agcatttcatcgggttggccaggcaagtccagagacttgcgcaagccgatGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGAt                                                 >  2:194400‑M2/51‑149 (MQ=255)                                                                                                    cTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGaaa                                                                                       >  5:174079/1‑110 (MQ=255)                                                                                                    cTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGaaa                                                                                       <  6:174079/110‑1 (MQ=255)                                                                                                     tATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGAt                                                 <  6:377758/147‑1 (MQ=255)                                                                                                     tATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGAt                                                 >  5:377758/1‑147 (MQ=255)                                                                                                       tttcatcgggttggccaggcaagtccagagacttgcgcaagccgatGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTAcc                                             >  6:898‑M2/47‑149 (MQ=255)                                                                                                       tCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTAc                                              <  5:345536/148‑1 (MQ=255)                                                                                                          catcgggttggccaggcaagtccagagacttgcgcaagccgatGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGt                                          >  3:104833‑M2/44‑149 (MQ=255)                                                                                                          aaTCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGt                                          <  6:220138/149‑1 (MQ=255)                                                                                                               GCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGAtt                                                <  5:297591‑M1/138‑1 (MQ=255)                                                                                                               GCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGAtt                                                >  6:297591‑M1/1‑138 (MQ=255)                                                                                                               GCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGc                                     <  6:67030‑M1/149‑1 (MQ=255)                                                                                                                      cAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGt                              >  5:114067/1‑149 (MQ=255)                                                                                                                       aaGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGtt                             <  3:53072/149‑1 (MQ=255)                                                                                                                        aGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTc                            <  6:194674/149‑1 (MQ=255)                                                                                                                              tGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTgg                         <  6:114067/146‑1 (MQ=255)                                                                                                                              tGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTgg                         <  2:87947/146‑1 (MQ=255)                                                                                                                                gACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCGTGGCCCGTGAAAGGGTCGTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCa                       <  2:285230/146‑1 (MQ=255)                                                                                                                                gACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAgg                     <  3:58191/148‑1 (MQ=255)                                                                                                                                   ttGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTa                 >  5:211478/1‑149 (MQ=255)                                                                                                                                     gCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTAcc               >  6:130649/1‑149 (MQ=255)                                                                                                                                          gCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGTTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGc            <  3:158913/147‑1 (MQ=255)                                                                                                                                          gCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGca           >  8:273331/1‑148 (MQ=255)                                                                                                                                          gCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGca           <  5:207968/148‑1 (MQ=255)                                                                                                                                            cAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGcac          >  5:184884/1‑147 (MQ=255)                                                                                                                                                  gatGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGCACAAGACttt  >  4:36573‑M2/4‑149 (MQ=255)                                                                                                                                                  gatGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGCGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGCACAAGACttt  >  2:133501‑M2/4‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGTGCCCGGATGTGGCGGTTGGCGGTGCTTGAGCAAATTG‑CCGCTGAACATGCTTATCGGGTGGGGGCGGGCGCTGAATCGATCGAATTCGCCTTGGCCTATCGAATCGGCTTGCGCAAGTCTCTGGACTTGCCTGGCCAACCCGATGAAATGCTCTATGCAGGGATCCCTGCCTTGAGTAACCAGGACCTTCTCCTGGCCCGTGAAAGGGTCCTGGCGCGACAGACCCGGGAGGGCATTGCTGATTACCTGTCACGCCAGTGGTTCTGGCAGGATTACCTGCACAAGACTTT  >  NC_002947/2737048‑2737340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.